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RBG_16_NSX_64_22_RBG_16_scaffold_2338_47

Organism: Nitrospirae bacterium RBG_16_64_22

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(28451..29092)

Top 3 Functional Annotations

Value Algorithm Source
rplC; 50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 Tax=RBG_16_Nitrospirae_64_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 213.0
  • Bit_score: 425
  • Evalue 3.70e-116
50S ribosomal protein L3 id=4795594 bin=GWC2_Nitrospirae-rel_56_14 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA similarity UNIREF
DB: UNIREF100
  • Identity: 59.7
  • Coverage: 206.0
  • Bit_score: 255
  • Evalue 4.70e-65
rplC; 50S ribosomal protein L3 similarity KEGG
DB: KEGG
  • Identity: 57.9
  • Coverage: 209.0
  • Bit_score: 237
  • Evalue 2.80e-60

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Taxonomy

RBG_16_Nitrospirae_64_22_curated → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 642
ATGCTGAACGGACTGGTGGGCCGCAAGCTCGGTATGAGCCAGGTCTTCACGCCGGAAGGAAGGGTCGTTCCCGTGACGGTCGTCGAAGCCGGGCCGTGCCGCGTGCTCAGATCGAAGACCGCGGCCGCGGACGGGTACGAGGCGGTGCAGGTGGGTTTCGCTCCGGAGCGGAAGGCGAAGCGCGTGACGTCCGCCATGAAGGGGCACTTCAAGGCGTGCGGCGCCGAGCCGTATCGCGTATTGCGGGAGTTCAAGGCGATTGGAGAGGCGCCGAGCGTCGGCTCGGACGTGACGGTGGAGATCTTCGAGGCCGGCGAGCGGATCGACGTGATCGGCGTGACGAAGGGGAAGGGGTTCCAGGGCGTCATGAAGCGTCTCCACTACCGCGGCGGGCCGGGTTCGCACGGCTCGATGTTCAACCGCGCCCCCGGGTCCATCGGCGCGAGTTCGTACCCATCGAGGGTTTGGAAAAACACGGGCCTTCCGGGGCAGATGGGGAACGCGTCCAGGACGGTGAAGAATCTCCAGGTCGTCGAGGTCCGGAAGGAGCAGAACCTCCTGTTCGTGAAGGGAGCGGTTCCGGGGCCCGACGGGGGACTCGTGATCGTTCGGAAGGCGAAGTCCGGGGCGAAGAAGAAGTAG
PROTEIN sequence
Length: 214
MLNGLVGRKLGMSQVFTPEGRVVPVTVVEAGPCRVLRSKTAAADGYEAVQVGFAPERKAKRVTSAMKGHFKACGAEPYRVLREFKAIGEAPSVGSDVTVEIFEAGERIDVIGVTKGKGFQGVMKRLHYRGGPGSHGSMFNRAPGSIGASSYPSRVWKNTGLPGQMGNASRTVKNLQVVEVRKEQNLLFVKGAVPGPDGGLVIVRKAKSGAKKK*