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RBG_16_NSX_64_22_RBG_16_scaffold_10850_1

Organism: Nitrospirae bacterium RBG_16_64_22

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(3..728)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein; K09690 lipopolysaccharide transport system permease protein Tax=RBG_16_Nitrospirae_64_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 242.0
  • Bit_score: 477
  • Evalue 9.20e-132
ABC transporter; K09690 lipopolysaccharide transport system permease protein id=12557474 bin=CNBR_ACIDO species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 44.7
  • Coverage: 226.0
  • Bit_score: 208
  • Evalue 9.70e-51
ABC transporter membrane protein similarity KEGG
DB: KEGG
  • Identity: 40.6
  • Coverage: 224.0
  • Bit_score: 179
  • Evalue 1.40e-42

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Taxonomy

RBG_16_Nitrospirae_64_22_curated → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 726
ATGAGCAACGCGGCTGATTTCATTTATGACTCAGACGTCCACAGTACGGTCCGGAGCCGGTTCCGCGAGGTGTGGGCGGCGCGGCACCTGCTCCAGAGTCTTGCCTGGCGCGACGTCAGGGTCCGATACAAGCAGTCGGTCCTTGGAATGGGCTGGGCCATGTTCGTTCCGCTCAGCATGATGCTGTTGTTTACTTTCGTCTTCACGCGAATCGTGCCGGTGCAGACCGACGTTCCGTATGCCATCTTCGCCTACTGCGGTCTTCTGCCCTGGACGTTCTTCTCGGCCAGCACGACCGCCGCGGTAAACAGCCTCGTGGCCAACCGGACGCTCGTGACCAAGATCTACGCACCGGCGGAAGTCTTTCCTCTTTCCGCCATCGGCGCCAGTTTCATCGATTTCCTGGTCGGAGGCATCGTTCTCGCCGGGCTCATGGTCTACTTCTCCCTGACCAGCGCCGCCGTTACGGTCTCGTGGACGGTGGTTCTCGTGGTCCCGGTCCTTCTCGTCCAGGTTCTGTTCACGGCCGGGGTGAGCTTCTTCCTGGCCACGGGGAACCTCTTCTTCCGGGACGTTCGCTACGTTTACAACGTCCTGGTAACCTTGTGGATGTTCGCCTCGTCGGTCATCTATCCCATGAAAGTGGATGACCCGACGGCGCAGGCCGTTCTCAACTTGAATCCCATGACGCCGATCCTGGATGCCTATCGGGACGTGCTCTTGCGC
PROTEIN sequence
Length: 242
MSNAADFIYDSDVHSTVRSRFREVWAARHLLQSLAWRDVRVRYKQSVLGMGWAMFVPLSMMLLFTFVFTRIVPVQTDVPYAIFAYCGLLPWTFFSASTTAAVNSLVANRTLVTKIYAPAEVFPLSAIGASFIDFLVGGIVLAGLMVYFSLTSAAVTVSWTVVLVVPVLLVQVLFTAGVSFFLATGNLFFRDVRYVYNVLVTLWMFASSVIYPMKVDDPTAQAVLNLNPMTPILDAYRDVLLR