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RBG_16_NSX_64_22_RBG_16_scaffold_18715_14

Organism: Nitrospirae bacterium RBG_16_64_22

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(11872..12747)

Top 3 Functional Annotations

Value Algorithm Source
shikimate 5-dehydrogenase (EC:1.1.1.25) Tax=RBG_16_Nitrospirae_64_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 291.0
  • Bit_score: 573
  • Evalue 1.90e-160
aroE; shikimate 5-dehydrogenase (EC:1.1.1.25) similarity KEGG
DB: KEGG
  • Identity: 47.5
  • Coverage: 280.0
  • Bit_score: 249
  • Evalue 9.90e-64
Shikimate dehydrogenase id=4757512 bin=GWA2_OP3_52_12 species=Paenibacillus vortex genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors similarity UNIREF
DB: UNIREF100
  • Identity: 47.2
  • Coverage: 290.0
  • Bit_score: 260
  • Evalue 2.60e-66

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Taxonomy

RBG_16_Nitrospirae_64_22_curated → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 876
ATGCGCATAAGCGGGCGAACGCGAACGTACGGAATTCTCGGCTACCCCGTCGGCCACTCTCTGTCTCCCGTGATGCAGAACGCGGCGTTCGCGCAGTTGAAGTTCGACGCCGCCTACCTTCCCTTCGAGGTGCGCCCGGAGGACCTGCGGGCGGCCCTCGACGGGGTCCGGGCGCTGGGGATCGCGGGGGTCAACGTGACCATTCCCCACAAGGAGGCGGTCCTGGCCTACCTCGACGACGTCGATCCCGAGGCGGCGGCCATCGGAGCGGTGAACACCGTCGTGAACCGCGACGGGCGGCTCATCGGGTACAACACGGACGGGGCCGGTTTCCTGGCCGCGCTGAAGTCGGAGGCCCGGTTTACACCCAAGAAACGGAACGTGCTGATCCTCGGGGCGGGCGGCGCGGCCCGTGGGATCGCCCACACCGTTGCGTCGGCGGGGGCCGCGAGCCTCGTGATCGCGAACCGGACCGTTTCGCACGCGGACCTTATGGCCCAGGGCCTGTCGCACCATTTCCCCTATCTCAAGGTCCGGACGTGCGATCTGAATCCCGCGGCGATGGAGCCGCATCTGGCCTCGGCGCATCTCGTGATTCAGACCACGTCCCTGGGCATGAAGCCGACGGACCCTTCTCCCCTTCCCGCCAAGCTGTTTCGGAAAGACCACGTCGTGTGCGACATCGTCTACACGCAGGAGACCCCTTTGCTCAAGGCGGCGCGGTCGCGGGGCGCCAAGGTGTCGGGGGGGCTCGGCATGCTCATCCACCAGGGCGCGGCGGCGGTCTTCCTCTGGACGGGGCGGCGTCCGAACCTGAATGCCATGAAACAGGCCCTCGTTGCGGGAATCCGGGCGAAATCCGCGAGAAAACGGTAG
PROTEIN sequence
Length: 292
MRISGRTRTYGILGYPVGHSLSPVMQNAAFAQLKFDAAYLPFEVRPEDLRAALDGVRALGIAGVNVTIPHKEAVLAYLDDVDPEAAAIGAVNTVVNRDGRLIGYNTDGAGFLAALKSEARFTPKKRNVLILGAGGAARGIAHTVASAGAASLVIANRTVSHADLMAQGLSHHFPYLKVRTCDLNPAAMEPHLASAHLVIQTTSLGMKPTDPSPLPAKLFRKDHVVCDIVYTQETPLLKAARSRGAKVSGGLGMLIHQGAAAVFLWTGRRPNLNAMKQALVAGIRAKSARKR*