ggKbase home page

RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_rifcsphigho2_01_scaffold_93_9

Organism: Burkholderiales bacterium RIFCSPHIGHO2_01_FULL_63_240

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38
Location: comp(9882..11858)

Top 3 Functional Annotations

Value Algorithm Source
lipopolysaccharide biosynthesis protein n=1 Tax=Pseudomonas chlororaphis RepID=UPI00030B50AF similarity UNIREF
DB: UNIREF100
  • Identity: 46.3
  • Coverage: 654.0
  • Bit_score: 569
  • Evalue 5.90e-159
lipopolysaccharide biosynthesis protein Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 658.0
  • Bit_score: 1255
  • Evalue 0.0
lipopolysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 654.0
  • Bit_score: 566
  • Evalue 8.30e-159

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Burkholderiales_63_240 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1977
ATGATCGACATCCGCTCCTCGCGCGACATCGTCCGCCTGTACTACATCTTCCGCCGCACCTTCGTGGTGGCGATGGCCGTGACCGCGCTGCTCATCGTGGCCGGCGCCTTCTTCTGGCCACCGAGCTACACCTCCGAGGCCCGCCTGCTGGTGCGCGCGGGCCGCGAAAACGTCACCGTGCCGCTGGACGTGGGCGAGCGCCAGGCCTACACGCCTTACGCCACGCAGCGCGACCCCATCGTCGACGACGAGAAGATGCTCACGGGCGATCCGGTGGTCAACCAGGTGGCGCGGCTGTACCTGGCCGAGGTGGCTGGCATGCCCGCGCCCGAGGGCTGGAAGGCGCAAATCAAGATCGCGCTCAAGAAGGGTGTGCAGGCTGTCATCGATGGCATGCGCGCCGTCACCGTCATGTTGGGTCTGACCGAGGCCCAGAGCCCGGAAGATCGCCTGGCCGCCAAGCTGGCCAGCAAGTTCAAGGTCAGCCATGGCATCGGCTCCAACGTGATGGAGCTCAGCTTCACCTGGGACGACCCGCAGACTGCGCAGCGCATCATGCAGACCTGGATCAAGGTCTACACCGATGAGCGCACCAACGTGCTGGGCCGCAAGAGCCTGGTGCCGTTCTACGACGGCAAGGTGCGTGGCGCCGACCAGCAGATCGAGTCGCTGAAGGAGCAGATGCGCACGCGCCTGGCCGCCATCGACGGCGTCAGCGCCGAAGAGCGCCTGACCGCTCTGACCAAGCGCATCAACGAGCTGCGCGACCGCCAGGCCGAGGCCCAGTCCGAGAAGAACGCCATCGAACATGGCGTGGCCTTCGCCACCAACCAGGCGGGCCGCATGAAGCGCGAGGTGGTGGCCGAACGCGAGGTGGGCCTGAGCCCCGCATGGATCGCGATGTCGGCCCAGCTCGCCGAGCTCAAGCGCCAGCGCACCGATGCCTTGCGCGTCTACAAGGAAGGCGCGCCAGCGCTGCTGGCCATCAACGAGAGCATCGCCGCCGTCGAGGCCCAGCTCAAGGCCGAGGAGCGCAACACCCAGCGCGCCGAAAAGCGCACGCCCAATGAACTGGGTGTGCTGCTCGAGCGCAACCAGCTTGAGAAGTCGATGCGCCTGCAGGAGCTGCGCTCCTTGACCGCCTCGATCGAACGCGAGCTCGAAACCCTGGGCAAGGCGCGCGCCCGCGTGCTCAGCCAGGAGCCTGAGCTGGCCCGCCTGGAGCAGTCCTTGCAGGTGGCCGAGAAGTCGCGCCTGCTCTACCTCGACAGCCTGGAGAAGGCCCGCATCGACCAGGCGCTGGACGACAGCCGCATCAACAACATCGCCGTCATCCAGGCCGCTTCGTTCAACCCCAGCCGCTCCAGCCCCAAGAGCCTGCTGCTGCTCATCCTCGCGCTGCCGGCCGGTGCCATGGTGGGCCTGCTGACGGTCTACATCAGCGCCATGCTCGACCAGCGCATCCACGACGGTGGCCGCATCGAGGCACGCTTTGGCGTGCCGCTTTGGGGCACGGTCAAGGACGTCAAGCCGGGTGAAGAGGACAACGAGTTCCACGCCAGCTTGCTGCGCATCGTCGGCACCTTGCCGATGGACCGCATCCGGGACAAGGGCCTGATCGTCGGCCTGGCCTCGTCGCGCAAGGGCGAAGGCGTGAGCTTCCTGATCATGCACATGGTGATGCAGTTGCAGGCGCTGGGCCTGACGGTGCGCGTCAACCCCGACGACGCTCGGGTGCAGCCAGGCGAGGTGGTGCTGATGAATGGCTCCAACCTGCTGAGCAGCCAGTCGGCCTTCGTGCGCCTGCGCCACGCCGACCTGATCGTGCTGGTCGTCGAGGCCCGCACCAGCATCGTGCCCGTGGTGGAAAACGCCCTGGGCATGCTGCGCACCGCCTTCCGCCGTGTCGACGGCGTCATCCTCAACCGCCGTCAGTACGAGGTCCCGGCCTCGGTGATGCGCTTCTGGCAGCGTTGA
PROTEIN sequence
Length: 659
MIDIRSSRDIVRLYYIFRRTFVVAMAVTALLIVAGAFFWPPSYTSEARLLVRAGRENVTVPLDVGERQAYTPYATQRDPIVDDEKMLTGDPVVNQVARLYLAEVAGMPAPEGWKAQIKIALKKGVQAVIDGMRAVTVMLGLTEAQSPEDRLAAKLASKFKVSHGIGSNVMELSFTWDDPQTAQRIMQTWIKVYTDERTNVLGRKSLVPFYDGKVRGADQQIESLKEQMRTRLAAIDGVSAEERLTALTKRINELRDRQAEAQSEKNAIEHGVAFATNQAGRMKREVVAEREVGLSPAWIAMSAQLAELKRQRTDALRVYKEGAPALLAINESIAAVEAQLKAEERNTQRAEKRTPNELGVLLERNQLEKSMRLQELRSLTASIERELETLGKARARVLSQEPELARLEQSLQVAEKSRLLYLDSLEKARIDQALDDSRINNIAVIQAASFNPSRSSPKSLLLLILALPAGAMVGLLTVYISAMLDQRIHDGGRIEARFGVPLWGTVKDVKPGEEDNEFHASLLRIVGTLPMDRIRDKGLIVGLASSRKGEGVSFLIMHMVMQLQALGLTVRVNPDDARVQPGEVVLMNGSNLLSSQSAFVRLRHADLIVLVVEARTSIVPVVENALGMLRTAFRRVDGVILNRRQYEVPASVMRFWQR*