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RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_4980_23

Organism: Candidatus Yanofskybacteria bacterium RIFCSPLOWO2_01_FULL_44_88

near complete RP 44 / 55 MC: 2 BSCG 45 / 51 ASCG 10 / 38 MC: 1
Location: comp(15097..16272)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor {ECO:0000313|EMBL:KKT50609.1}; TaxID=1619021 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA1_44_21.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 391.0
  • Bit_score: 755
  • Evalue 4.80e-215
RNA polymerase sigma factor id=1915996 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria) similarity UNIREF
DB: UNIREF100
  • Identity: 84.0
  • Coverage: 400.0
  • Bit_score: 644
  • Evalue 5.00e-182
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 390.0
  • Bit_score: 393
  • Evalue 5.70e-107

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Taxonomy

GWA1_OD1_44_21_partial → Yanofskybacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1176
ATGGCAAAAACAAAAAAGAAAACCAATAAGGGAAAAAAGAAAGCCGGAAAACAATCCAAGAAACCGGCCCAAAAATCAAGGCCGGCGAAAGATAAAGGCGTCATATCGGAGAGCGCCGTTTTACAGTTGATTGAAAAAGGCCGCCATCGCGGCTTTGTCACCCAGGCCGAAGTTTTAAACACTTTTCCCAATATTGAAAAAGACATCAAAGGCCTTGAAGCGCTATACGAGCGTCTAGAGGGAGCGAACATCAACATCATAGAATCGGGTCGGGTGTTTGAGGAGGAAAAAGTAAAAGAATACGACGAAAAGAAAAAAATAGAAACCGAATTCGGCGAATCATCGACTTCGGATTCCGTCCAGATGTATTTGAAAGAAATCGGGCAATATTCGCTCTTGACGAGCGAAGAGGAGGTAGATCTGGCAAAAAGAATAGAGAAAAATGACGAATCGGCAAGGCAGAAGCTCGCTCTCTCAAACCTTCGCCTGGTTGTTTCCATAGCCAAGAAATATGTCGGACGCTCGGCCAATCTGACTTTGCTTGATCTGATTCAGGAAGGCAACATCGGCTTGTTCAAGGCTGTTGAAAAGTTCGATTACAAGAAGGGGTATAAATTCTCGACATACGCAACGTGGTGGATTCGGCAGGCGATTACCAGAGCATTAGCCGATCAAGGCCGAACGATTCGCATCCCGGTCCATATGGTTGAAACAATAAATAAATACCAGCAGATTGTTAGAAGACTGGTTCAGGACTTAGGTCGGGAGCCGATGCCGGAAGAAATAGCTGCGGAAATGGGCGTTGATATCGACAAAATAAGACATATACAAAAAATATCCCAGGATACAATATCTCTGGAAACTCCAGTCGGGGATGAAGGCGAGGATTCGAGCCTCGAAGCGTTCATACCCGACGAGGACTCGGTATCTCCGTCAATGTCCGCGGCCAGGAAAATATTGAAAGCTTACATCAATGAAATTATCGCCGATCTGACCGTCAGAGAACAAAAGATACTGGATATGCGTTTCGGTTTGACTGACGGCGTAACTCACACTCTGGAAGAAGTCGGAAAAGTTTTCTCGGTTACCAGAGAAAGAATCAGGCAAATTGAGGCTAAAGCGCTGGATAAAATCAGACAGCATCACAAGCTCTCCAAACTTAAGGGGTACGAATAG
PROTEIN sequence
Length: 392
MAKTKKKTNKGKKKAGKQSKKPAQKSRPAKDKGVISESAVLQLIEKGRHRGFVTQAEVLNTFPNIEKDIKGLEALYERLEGANINIIESGRVFEEEKVKEYDEKKKIETEFGESSTSDSVQMYLKEIGQYSLLTSEEEVDLAKRIEKNDESARQKLALSNLRLVVSIAKKYVGRSANLTLLDLIQEGNIGLFKAVEKFDYKKGYKFSTYATWWIRQAITRALADQGRTIRIPVHMVETINKYQQIVRRLVQDLGREPMPEEIAAEMGVDIDKIRHIQKISQDTISLETPVGDEGEDSSLEAFIPDEDSVSPSMSAARKILKAYINEIIADLTVREQKILDMRFGLTDGVTHTLEEVGKVFSVTRERIRQIEAKALDKIRQHHKLSKLKGYE*