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RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591

Search features with annotation key words

Displaying items 31-60 of 183 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_31
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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comp(25001..25099)
DNA (99bp) protein (33aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_32
GWA1_OD1_44_25, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

25118..25333
DNA (216bp) protein (72aa)
Protein containing Helix-turn-helix type 3 domain protein {ECO:0000313|EMBL:KKT60090.1}; TaxID=1618645 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_G
Helix-turn-helix id=4731860 bin=GWC2_OD1_43_27 species=Nostoc sp. genus=Nostoc taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
putative transcription factor, MBF1 like protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_33
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

25339..26145
DNA (807bp) protein (269aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
MspA1I restriction endonuclease id=4731859 bin=GWC2_OD1_43_27 species=Moraxella sp. A1 genus=Moraxella taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_34

Not on your lists

comp(26119..26991)
DNA (873bp) protein (291aa)
D12 class N6 adenine-specific DNA methyltransferase {ECO:0000313|EMBL:KKU29939.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46
D12 class N6 adenine-specific DNA methyltransferase id=4731858 bin=GWC2_OD1_43_27 species=Nostoc sp. genus=Nostoc taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
DNA adenine methylase Dam
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_35
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

27558..27683
DNA (126bp) protein (42aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_36
GWA1_OD1_44_25, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists


27788..28903
DNA (1116bp) protein (372aa)
Putative tRNA threonylcarbamoyladenosine biosynthesis protein Gcp n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PYF3_9BACT
Putative tRNA threonylcarbamoyladenosine biosynthesis protein Gcp {ECO:0000313|EMBL:KKT60093.1}; TaxID=1618645 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium
DNA-binding/iron metalloprotein/AP endonuclease
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_37

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28924..31032
DNA (2109bp) protein (703aa)
valyl-tRNA synthetase (EC:6.1.1.9)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000369942C
Valine-tRNA ligase {ECO:0000313|EMBL:KKU29941.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_38

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31020..31739
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003801EA9
Uncharacterized protein {ECO:0000313|EMBL:KKU29942.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_39

Not on your lists

31749..32198
DNA (450bp) protein (150aa)
Small heat shock protein {ECO:0000313|EMBL:KKT28471.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
heat shock protein Hsp20; K13993 HSP20 family protein id=5803649 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
heat shock protein Hsp20
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_40
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(32406..32816)
DNA (411bp) protein (137aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_41

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comp(32885..33196)
DNA (312bp) protein (104aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU29944.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_42

Not on your lists

comp(33504..33800)
DNA (297bp) protein (99aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU29945.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_43

Not on your lists

comp(33797..34303)
DNA (507bp) protein (169aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU29946.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_44

Not on your lists

comp(34287..34853)
DNA (567bp) protein (189aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU29947.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
seg id=5803263 bin=OD1_GWC2_34_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_45
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(34850..35935)
DNA (1086bp) protein (362aa)
Cell division protein FtsA
Type IV pilus assembly protein PilM Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
Type IV pilus assembly protein PilM id=5227483 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_46

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comp(35943..37814)
DNA (1872bp) protein (624aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU29949.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
S-layer domain protein id=2824651 bin=GWC1_OD1_38_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_47

Not on your lists

comp(37816..38295)
DNA (480bp) protein (160aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT29538.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
Putative uncharacterized protein id=15191291 bin=GWC1_OP11_49_16_COMPLETE species=OP11_1 genus=OP11_1 taxon_order=OP11_1 taxon_class=OP11_1 phylum=OP11 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_48
GWC2_OD1_45_7_partial, Azambacteria, Parcubacteria, Bacteria

Not on your lists

comp(38295..38783)
DNA (489bp) protein (163aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU12701.1}; TaxID=1618621 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWC2_45_7b.;"
id=2824648 bin=GWC1_OD1_38_17 species=ACD24 genus=ACD24 taxon_order=ACD24 taxon_class=ACD24 phylum=WWE3 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_49
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(38802..39248)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7Q148_9BACT
Uncharacterized protein Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_50
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(39253..40488)
DNA (1236bp) protein (412aa)
pilus assembly protein PilC; K02653 type IV pilus assembly protein PilC Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
Type II secretion system F domain id=2824644 bin=GWC1_OD1_38_17 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
pilus assembly protein PilC
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_51

Not on your lists


comp(40469..41764)
DNA (1296bp) protein (432aa)
Glycine-tRNA ligase {ECO:0000313|EMBL:KKU29954.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
Glycine--tRNA ligase id=2824158 bin=GWC1_OD1_38_17 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
glycyl-tRNA synthetase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_52
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(41774..43642)
DNA (1869bp) protein (623aa)
id=2824162 Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
id=2824162 bin=GWC1_OD1_38_17 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_53
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(43621..44142)
DNA (522bp) protein (174aa)
DNA repair protein recO; K03584 DNA repair protein RecO (recombination protein O) Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
DNA repair protein RecO id=1733818 bin=GWD2_RBX1-related_39_127 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
DNA repair protein recO
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_54

Not on your lists

comp(44148..47681)
DNA (3534bp) protein (1178aa)
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003827A64
Isoleucine-tRNA ligase {ECO:0000313|EMBL:KKU29957.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_55

Not on your lists

comp(47694..48389)
DNA (696bp) protein (232aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU29958.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_56

Not on your lists

comp(48545..48925)
DNA (381bp) protein (127aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU29959.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_57
GWC2_OD1_45_7_partial, Azambacteria, Parcubacteria, Bacteria

Not on your lists


comp(49286..50968)
DNA (1683bp) protein (561aa)
toc:Toce_2184 arginyl-tRNA synthetase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19] id=86447 bin=ACD58 species=ACD58 genus=ACD58 taxon_order=ACD58 taxon_class=ACD58 phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine-tRNA ligase {ECO:0000313|EMBL:KKU12858.1}; TaxID=1618621 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWC2_45_7b.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_58

Not on your lists

comp(51036..51293)
DNA (258bp) protein (86aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU29961.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_59

Not on your lists

comp(51343..52473)
DNA (1131bp) protein (377aa)
Threonine synthase {ECO:0000313|EMBL:KKU29962.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
Threonine synthase id=1835786 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
threonine synthase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_60
GWA1_OD1_44_25, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(53187..53651)
DNA (465bp) protein (155aa)
SsrA-binding protein {ECO:0000313|EMBL:KKT60116.1}; TaxID=1618645 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA1_44_25.;"
SsrA-binding protein id=4731743 bin=GWC2_OD1_43_27 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
smpB; SsrA-binding protein
Displaying items 31-60 of 183 in total

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