ggKbase home page

RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_21380_5

Organism: Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_01_FULL_45_140

near complete RP 43 / 55 BSCG 47 / 51 ASCG 10 / 38
Location: 2557..3216

Top 3 Functional Annotations

Value Algorithm Source
Repressor in ring oxydation complex/ phenylacetic acid degradation pathway related protein (PaaX) {ECO:0000313|EMBL:KKU28991.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 219.0
  • Bit_score: 450
  • Evalue 1.40e-123
paaX; repressor in ring oxydation complex/phenylacetic acid degradation pathway related protein (PaaX); K02616 phenylacetic acid degradation operon negative regulatory protein id=16444 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i similarity UNIREF
DB: UNIREF100
  • Identity: 36.2
  • Coverage: 207.0
  • Bit_score: 137
  • Evalue 1.50e-29
paaX; repressor in ring oxydation complex/phenylacetic acid degradation pathway-like protein (paaX) similarity KEGG
DB: KEGG
  • Identity: 35.3
  • Coverage: 119.0
  • Bit_score: 64
  • Evalue 3.40e-08

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 660
ATGCCAAAACATAAGCCGATTTATTTTGCTGACCCGAAAATATCGGACGAAGTTAAAGATCGCGTAAGAGAATTTGTTGCTAAACATCCAATTGCTTCGTCAACCATTAAAGCATTGCTTGCTACAGCAATTTTGGGCGGGGTGCTAACGATAGCCGCCGTAGCGCCGGGAATCGTCGCTTTTGCTGGTAAGGGTTTGGCTATGGCCAAAAAAAACAAACAAGAGCGTTATCAAAATCTTTGGGCAAGATTTCACGCTTTAAAAAAGCGCAATGTGTTTGAGTGTGTAGGAGAGTCGCCAAATGGAGGATTAATTTATAGATTTACAGAAAGCGGCCGCGATCTGACTAAAAAATTATTACTTGAAACATTAGAAATAAAATCTTCGTCAAAATGGGACAAAAAATGGCATGTTGTTGTATTCGATATTCCGGAGAAGTATAAAAAGGCCAGATACGCTTTGTGGAGCCAATTAAAAAATTTGGGCTTTTATCAGCTTCAAAGAAGCGTATGGGTTCACCCATTTCCTTGCGAGCACGAAATTAAGTTTTTATGCGATATATTTAATATCCATCCTTTTGTTGAGGTTTTTACGACAGAAGATTTAAATAACGGGAAAATTTTATATCATTTTAAAAGTATTTTGCGAAAAACAGTTTAA
PROTEIN sequence
Length: 220
MPKHKPIYFADPKISDEVKDRVREFVAKHPIASSTIKALLATAILGGVLTIAAVAPGIVAFAGKGLAMAKKNKQERYQNLWARFHALKKRNVFECVGESPNGGLIYRFTESGRDLTKKLLLETLEIKSSSKWDKKWHVVVFDIPEKYKKARYALWSQLKNLGFYQLQRSVWVHPFPCEHEIKFLCDIFNIHPFVEVFTTEDLNNGKILYHFKSILRKTV*