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RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_8873_9

Organism: Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_68_150

near complete RP 50 / 55 BSCG 50 / 51 ASCG 12 / 38
Location: comp(9510..9926)

Top 3 Functional Annotations

Value Algorithm Source
endoribonuclease L-PSP; K07567 TdcF protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 138.0
  • Bit_score: 273
  • Evalue 1.50e-70
putative endoribonuclease L-PSP; K07567 TdcF protein id=12556581 bin=CNBR_ACIDO species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 45.2
  • Coverage: 124.0
  • Bit_score: 111
  • Evalue 9.30e-22
endoribonuclease L-PSP similarity KEGG
DB: KEGG
  • Identity: 44.7
  • Coverage: 123.0
  • Bit_score: 106
  • Evalue 6.40e-21

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Taxonomy

R_Betaproteobacteria_68_150 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 417
ATGCACCTTGAGCTCAAGCAGTCCGTGATGAGCAGCGAGGCGCCGGCGGGGCGCGGTCCTTTTCCCCAGGCTGTCCAGGTCGGCCCCCTGGTTTTTGTGTCGGGACAGGGGCCGATCTCGCGCGCGACGAATCGGCCGATCGACGGCGATTTCACCGCGCAGGTGCGTGAGACGTTTGCAAACCTGGGCAACATTCTCGCCGCCGCCGGTCTGAGCCTTGCGCATGTCGTGAAGGTTACTGTCTACCTTTCCGATATCGCGCGGGTGCCGGATTTCAACCGGTTGTACGAGGTACTGATGCCGAAGCCGTATCCCGCTCGAACACTGGTGCAGGCGGGCTTGCGCGGCATCAATGTCGAGATGGACGTAATCGCCGCACATCCTGCCATCGCGGCATGGGCCGCAACGAGGGAGTAG
PROTEIN sequence
Length: 139
MHLELKQSVMSSEAPAGRGPFPQAVQVGPLVFVSGQGPISRATNRPIDGDFTAQVRETFANLGNILAAAGLSLAHVVKVTVYLSDIARVPDFNRLYEVLMPKPYPARTLVQAGLRGINVEMDVIAAHPAIAAWAATRE*