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RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_5089

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_5089_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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3..1397
DNA (1395bp) protein (465aa)
Putative uncharacterized protein n=1 Tax=uncultured marine microorganism HF4000_APKG10H12 RepID=B3TC82_9ZZZZ
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_5089_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(1459..2199)
DNA (741bp) protein (247aa)
16S ribosomal RNA methyltransferase RsmE; K09761 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
16S ribosomal RNA methyltransferase RsmE (EC:2.1.1.-)
hypothetical protein n=1 Tax=Desulfurispora thermophila RepID=UPI000367B452
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_5089_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

2330..3313
DNA (984bp) protein (328aa)
prkC; serine/threonine-protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] id=12555182 bin=CNBR_ACIDO species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
serine/threonine protein kinase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_5089_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

3351..4328
DNA (978bp) protein (326aa)
branched-chain amino acid aminotransferase; K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
branched-chain amino acid aminotransferase; K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] id=12555181 bin=CNBR_ACIDO species=Chloroflexus aggregans genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
branched-chain amino acid aminotransferase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_5089_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

4349..5494
DNA (1146bp) protein (382aa)
Twitching motility protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NZI1_9BACT
twitching motility protein; K02669 twitching motility protein PilT Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
twitching motility protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_5089_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

5520..5975
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Paenibacillus massiliensis RepID=UPI000378429B
recX; regulatory protein recX; K03565 regulatory protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
recX; regulatory protein recX
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_5089_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(5984..7369)
DNA (1386bp) protein (462aa)
yliI3; NHL repeat-containing protein (EC:1.1.1.-) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
NHL repeat-containing protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GT37_9BACT
L-sorbosone dehydrogenase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_5089_8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists


7473..10124
DNA (2652bp) protein (884aa)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
alaS; alanyl-tRNA ligase (EC:6.1.1.7) id=12555178 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_5089_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(10215..10928)
DNA (714bp) protein (238aa)
acireductone synthase (EC:3.1.3.77) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
acireductone synthase (EC:3.1.3.77)
PREDICTED: enolase-phosphatase E1-like n=1 Tax=Ceratitis capitata RepID=UPI00032A0523
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_5089_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(10925..11491)
DNA (567bp) protein (189aa)
Acireductone dioxygenase ARD; K08967 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Acireductone dioxygenase n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8LFR6_9CYAN
Acireductone dioxygenase ARD
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_5089_11
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(11567..12172)
DNA (606bp) protein (202aa)
methylthioribulose-1-phosphate dehydratase; K08964 methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Methylthioribulose-1-phosphate dehydratase n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZQM9_9PLAN
methylthioribulose-1-phosphate dehydratase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_5089_12
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

12294..12986
DNA (693bp) protein (231aa)
Lytic transglycosylase catalytic n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z6B4_9NEIS
lytic transglycosylase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_5089_13
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists


13129..13392
DNA (264bp) protein (88aa)
rpsT; 30S ribosomal protein S20; K02968 small subunit ribosomal protein S20 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
30S ribosomal protein S20; K02968 small subunit ribosomal protein S20 id=12555176 bin=CNBR_ACIDO species=Nitrosomonas sp. AL212 genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rpsT; 30S ribosomal protein S20
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_5089_14
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(13423..14400)
DNA (978bp) protein (326aa)
HolA; DNA polymerase III, delta subunit; K02340 DNA polymerase III subunit delta [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
id=12555175 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
HolA; DNA polymerase III, delta subunit
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_5089_15
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(14417..14983)
DNA (567bp) protein (189aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein id=12555174 bin=CNBR_ACIDO species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Displaying 15 items

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