ggKbase home page

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6067_18

Organism: Acidobacteria bacterium RIFCSPLOWO2_12_FULL_65_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 17869..18204

Top 3 Functional Annotations

Value Algorithm Source
PadR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 111.0
  • Bit_score: 223
  • Evalue 1.40e-55
PadR family transcriptional regulator id=12556716 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 67.3
  • Coverage: 113.0
  • Bit_score: 155
  • Evalue 2.60e-35
PadR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 61.8
  • Coverage: 110.0
  • Bit_score: 138
  • Evalue 9.40e-31

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 336
ATGGGAACGACCGAAGTCCCTGATCTTCTCCCGGGCACGCTCGAGCTGCTGATCCTCAAGACGCTCGCCGCCGGCCCGATGCACGGCTACGGGATCGCGCAGCATCTCCAGCAGGTGTCGGACGAAGTCCTGCAGGTGGGCGAGAGCTCGCTCTATCCGGCGCTCCAACGGCTGCTGCTCAAGGGTTGGGTCAGGGCAGCCTGGGGCGCGTCGGAGAACAACCGCCGCGCCCGTTACTACACGCTCACCCCGTCCGGCCGCAAGCAGCTGACGGTCGAGCGCAAAGAGTTCGACCGCCTCATCTTCGCTATTCACAAAGTCCTCAACACTGCATAG
PROTEIN sequence
Length: 112
MGTTEVPDLLPGTLELLILKTLAAGPMHGYGIAQHLQQVSDEVLQVGESSLYPALQRLLLKGWVRAAWGASENNRRARYYTLTPSGRKQLTVERKEFDRLIFAIHKVLNTA*