ggKbase home page

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_16875_4

Organism: Acidobacteria bacterium RIFCSPLOWO2_12_FULL_65_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 4590..5321

Top 3 Functional Annotations

Value Algorithm Source
ATP dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1] id=12555425 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 66.9
  • Coverage: 242.0
  • Bit_score: 322
  • Evalue 2.70e-85
DNA ligase D Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 243.0
  • Bit_score: 506
  • Evalue 1.90e-140
DNA ligase D similarity KEGG
DB: KEGG
  • Identity: 51.3
  • Coverage: 224.0
  • Bit_score: 215
  • Evalue 1.70e-53

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 732
ATGCCTCTTGATGAGTATCGAAAGAAGCGAGACTTCAGCAAGACGCCAGAGCCGGCCGGCAAGGCGGCGAAGAGCAAGACGCACGAAGGGTTCTTCTGCGTCCAGAAGCACCTCGCCAGTCATCTCCACTACGATTTCCGTCTGGAGCACAACGGTGTGCTTCTCTCATGGGCCGTGCCGAAGGGGCCGTCGCTCGATCCATCGGTCAAGCGGCTCGCCATGCACGTCGAAGACCACCCGATCGAGTACGGCGAGTTCGAAGGCGTCATCCCAGAAGGCTACGGCGCGGGCATCGTGATGCTGTGGGATCGCGGCACCTGGACGCCGGAGGTCGCCGACGTCGACGCGGCGCTCGCGAAGGGCGATCTCAAGTTCACGCTGAACGGCTACAAGCTCAAAGGGTCGTGGGTACTCGTACGAACGAGCGGCCGCTATCCCGGCGCGCGGCGTGGATCGGGCCGGGGGGAAGGGGCGACCGGATCAGGTGATGGCCGAAGCTGGCTGCTGATCAAACATCGCGACGAGTGGTCGGGCGATCTCGACATCACCGAGTTTTCGCCGAAGAGCATCAAGAGCGACGGCGACCTCGAGGACATCCTCGCCGCGGACACGCCGGAGGTGTGGCGATCTGGCAAACCAGCCAAAGGTGGCGCCGCCGGCGCGATGCTGACAGCAATCATCGATCGCGCGGCACAACCCAAAGCGAAACGGAAACCGAAACGGACTCGCTAG
PROTEIN sequence
Length: 244
MPLDEYRKKRDFSKTPEPAGKAAKSKTHEGFFCVQKHLASHLHYDFRLEHNGVLLSWAVPKGPSLDPSVKRLAMHVEDHPIEYGEFEGVIPEGYGAGIVMLWDRGTWTPEVADVDAALAKGDLKFTLNGYKLKGSWVLVRTSGRYPGARRGSGRGEGATGSGDGRSWLLIKHRDEWSGDLDITEFSPKSIKSDGDLEDILAADTPEVWRSGKPAKGGAAGAMLTAIIDRAAQPKAKRKPKRTR*