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RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3461_25

Organism: Acidobacteria bacterium RIFCSPLOWO2_12_FULL_65_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 22854..23633

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 259.0
  • Bit_score: 516
  • Evalue 1.90e-143
tRNA-pseudouridine synthase A id=12556753 bin=CNBR_ACIDO species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 53.2
  • Coverage: 250.0
  • Bit_score: 239
  • Evalue 4.20e-60
tRNA pseudouridine synthase A similarity KEGG
DB: KEGG
  • Identity: 52.0
  • Coverage: 248.0
  • Bit_score: 228
  • Evalue 2.10e-57

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 780
ATGGCAACGTTCAAGATCACCCTGGCGTACGACGGAACTGAGTTCGTCGGGTGGCAGCGACAGGCGACCGGGACGTCGATCCAGGGTCTCCTCGAAGGTGCGCTTGGCGAGCTGGACGGTCGCAAGGTGACCGTCACCGGCGCGGGTCGGACCGATGCCGGCGTCCATGCGCTCGGTCAGGTCGCCAGCTGTTCAATCGAGCGTTCGATCGCGAGCGGCCAGCTCGTCGGTGCCCTCAACGCACGACTGCCTGTCGATGTCCGAGTGCTGTCGGCGGCAGAGGTGCCGCCCACATTCCATGCGCGGTTCGACGCGCGCGCGAAAACGTACCGCTACCGGATCTGGAATGCCGACGTTGTCAGTCCCTTCGAGCGCCGGTACGCCTGGCATGTCGACGCCGCGCTCGATGTCGGCGCGATGAATGCCGCCGCGCGGCTCCTCGAAGGCCGCCACGATTTCGCGGCGTTCCGGGCTGCCGGGAGCGCAGCGCGTACGACAGACCGCATGGTGATCGCGTCGCGCGTCGATCGTCGGGATCGCCTGGTCGTCTATGAGATTACCGGCGACGGATTCCTCCGCTACATGGTCCGCGCGATCGTCGGCACGCTGGTCGAGATCGGCCGTGGACGACAGCCGCCCGAGTGGATGGGCGATGTGCTCGGCGCACGCGATCGGGCGCGCGCCGGACCGACCGCGCCGCCCGAAGGGCTGTTTCTTGTGCGCGTGGATTACGGCGGGCCCGGTAAAGTCCCTCTGAAGGCGGACACTACAGGGGTCTAA
PROTEIN sequence
Length: 260
MATFKITLAYDGTEFVGWQRQATGTSIQGLLEGALGELDGRKVTVTGAGRTDAGVHALGQVASCSIERSIASGQLVGALNARLPVDVRVLSAAEVPPTFHARFDARAKTYRYRIWNADVVSPFERRYAWHVDAALDVGAMNAAARLLEGRHDFAAFRAAGSAARTTDRMVIASRVDRRDRLVVYEITGDGFLRYMVRAIVGTLVEIGRGRQPPEWMGDVLGARDRARAGPTAPPEGLFLVRVDYGGPGKVPLKADTTGV*