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RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6616_18

Organism: Acidobacteria bacterium RIFCSPLOWO2_12_FULL_65_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(18144..19535)

Top 3 Functional Annotations

Value Algorithm Source
Fis family transcriptional regulator; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 463.0
  • Bit_score: 896
  • Evalue 1.60e-257
two component, sigma54 specific, Fis family transcriptional regulator; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX id=12554124 bin=CNBR_ACIDO species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 64.7
  • Coverage: 481.0
  • Bit_score: 601
  • Evalue 5.80e-169
sigma-54 factor interaction domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 55.0
  • Coverage: 460.0
  • Bit_score: 484
  • Evalue 3.80e-134

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1392
ATGCCTAAGTCGCGGGTCCTCGTCATCGACGATGAGGCTGCCATCAGGGACTCGCTGAAGATGACCCTCGAGTACGAGGGTTACGAGTGTCTGGGCGCGGCCACCGGACAGGAAGGCCTCACGATTGCCGAGCGCGAGGTGCCAGACCTCGTGCTGCTCGACGTGAAGATGCCGGGGATGGATGGCCTGGAGGTGCTCGATCGGCTGCGCTCGATGAACGAGTCGACGCCGGTCATCGTGATTTCCGGCCACGGGAGCATCAGTACGGCGGTCGAGGCTACCAAGAAGGGCGCGTTCGACTTCATCGAGAAGCCGTTTGCCAGCGACCGCGTGCTGGTCGGCCTGCGTAACGCGCTCGCCCAGAGGCAGCTGCGCGACGAGAACCGGACGCTCCGCAAGGTGGTCGAAGTCCGCCACCAGATGATTGGCGAGAGCACGGCGCTCAAGAGCGTCATGGCAGCCGTCGGCCGGGCGGCGCCCACCAACGCGACCGTGCTCATTGCTGGCGAGAGCGGTGTGGGCAAAGAGCTCGTGGCGCGGACCATCCACCGCAACAGCCTCAGAAGCCGCGAGCGGTTCGTGCAGGTCAACTGCGCCGCCATTCCCGAAGAGCTCATCGAGAGCGAGCTCTTCGGCCACGAGAAGGGATCCTTCACGGGCGCCACCGAGAAGCAGATCGGCAAGTTCGAGCAGGCCGATCGCGGCACGATCTTCCTCGATGAGGTCGGCGACATGAGCGCGAAGACGCAGGCCAAGGTGCTGCGGGTGCTGCAGGAGGGCGAGGTCGAGCGGCTGGGATCGGCGCGCACGATTAAGGTGGACGTGCGCGTCATCGCGGCGACCAACAAGAGCCTGGAAGAGGAGATTGAGAAGGGCCGGTTTCGGGACGATCTGTACTTTCGGCTCGCCGTCATCCCGATCTTCGTCCCGCCGCTGCGCGAGCGCACCGGGGACATTCCGCTGCTCGTCCGTCACTGCATGGATCTATTCAGCCGCGAGAACAACCTGAGGCCCAAGCGCATCACGCCGGCGGCGCTCGACGCCTTGCAGCGGTGTCGGTGGAAGGGCAACGTGCGCGAGCTGAGCAACACCGTCGAGCGGCTGATCATCATGACGGAGGGCGACACGATCGACGTCGCCGATCTGCCCGAGAGCGTGCGGTCGCCATCGGCCGGTGCCGCGCGCGGCGGTTCGGGCACGGCGGACACCGACGGCGTGAAGGCGGGTACCCTGCGTGAGTTCAAGGACAACGCCGAGCGGGCGTACCTCGTAGCCAAGCTGCGTGAGAACGGCTGGAACATCTCGAGGACGGCCGAAGTGATCGACACGCCCCGCAGCAATCTCTACAAGAAGCTCGAGCAATATCAGATCTCACAGGAGACTGACGGGTAG
PROTEIN sequence
Length: 464
MPKSRVLVIDDEAAIRDSLKMTLEYEGYECLGAATGQEGLTIAEREVPDLVLLDVKMPGMDGLEVLDRLRSMNESTPVIVISGHGSISTAVEATKKGAFDFIEKPFASDRVLVGLRNALAQRQLRDENRTLRKVVEVRHQMIGESTALKSVMAAVGRAAPTNATVLIAGESGVGKELVARTIHRNSLRSRERFVQVNCAAIPEELIESELFGHEKGSFTGATEKQIGKFEQADRGTIFLDEVGDMSAKTQAKVLRVLQEGEVERLGSARTIKVDVRVIAATNKSLEEEIEKGRFRDDLYFRLAVIPIFVPPLRERTGDIPLLVRHCMDLFSRENNLRPKRITPAALDALQRCRWKGNVRELSNTVERLIIMTEGDTIDVADLPESVRSPSAGAARGGSGTADTDGVKAGTLREFKDNAERAYLVAKLRENGWNISRTAEVIDTPRSNLYKKLEQYQISQETDG*