ggKbase home page

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_12318_16

Organism: Acidobacteria bacterium RIFCSPLOWO2_12_FULL_65_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(18778..19371)

Top 3 Functional Annotations

Value Algorithm Source
OmpA/MotB protein; K03640 peptidoglycan-associated lipoprotein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 197.0
  • Bit_score: 388
  • Evalue 7.80e-105
peptidoglycan-associated lipoprotein; K03640 peptidoglycan-associated lipoprotein id=12554073 bin=CNBR_ACIDO species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 49.7
  • Coverage: 197.0
  • Bit_score: 180
  • Evalue 1.40e-42
peptidoglycan-binding outer membrane lipoprotein Pal, OmpA family similarity KEGG
DB: KEGG
  • Identity: 44.4
  • Coverage: 189.0
  • Bit_score: 147
  • Evalue 4.70e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 594
ATGTCGAAATCACACACGATCACGTCGCGCCTGTTGCTGGCCGCGCTGACGGTCGCTGCCGCCGGCTGCGCCGCCAAGACATCCCCCGACGTCCAGGGCGCCCCATCCCCGGGCCCGCCCCTCAGCGCGGGTTCGCCGATCTCCGTGCCTGCGCCACCAGCGCCGTCGGCGCCGCCTGCGCCGGTCGGTGAGCCTGTTCCGGTGCCGGTGCGAGATGAAGTCATCGTGGCCTCGTCGCTCGACGACCTCAACCGCACGTCGCCGCTTCAGCCCGTGTTTTTCGCGTTGGACAGCAACAGCCTCGACCAGACGGCACAGACCACGCTCGACCAGAACGCCGCCGTCCTGAGAAAGCACCCGAGCTGGGCCGTGATGATCGAAGGCCACTGCGACGAGCGGGGCACGGCCGAGTACAATCTCCCTCTGGGCGAACGCCGGGCGGTCGCTGTGCGCGCGCACCTGATCTCGCTCGGTATCCCGGCCAGCCAGATCCAGGTGGTCAGCTACGGCAAGGAGTTCCCGTTCGACCCTGGTCACGACGAAGCCGCGTGGGCCAAGAACCGGCGTGCGCACTTCGTCATTACCGCACAGTGA
PROTEIN sequence
Length: 198
MSKSHTITSRLLLAALTVAAAGCAAKTSPDVQGAPSPGPPLSAGSPISVPAPPAPSAPPAPVGEPVPVPVRDEVIVASSLDDLNRTSPLQPVFFALDSNSLDQTAQTTLDQNAAVLRKHPSWAVMIEGHCDERGTAEYNLPLGERRAVAVRAHLISLGIPASQIQVVSYGKEFPFDPGHDEAAWAKNRRAHFVITAQ*