ggKbase home page

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_12318_21

Organism: Acidobacteria bacterium RIFCSPLOWO2_12_FULL_65_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 22948..24753

Top 3 Functional Annotations

Value Algorithm Source
recN; DNA repair ATPase RecN; K03631 DNA repair protein RecN (Recombination protein N) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 601.0
  • Bit_score: 1158
  • Evalue 0.0
DNA repair protein RecN; K03631 DNA repair protein RecN (Recombination protein N) id=12554078 bin=CNBR_ACIDO species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 50.7
  • Coverage: 564.0
  • Bit_score: 512
  • Evalue 7.80e-142
recN; DNA repair ATPase RecN similarity KEGG
DB: KEGG
  • Identity: 42.7
  • Coverage: 576.0
  • Bit_score: 410
  • Evalue 1.20e-111

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1806
ATGCTCCGCTTCCTGCGCATCAACCAATTGGCGGTCATCGACTCGGTCGAACTCGAGCTTGCCGCCGGGTTGAATGTGCTGACCGGCGAGACCGGGACCGGCAAGTCGATCCTGGTGGAGGCCGTCGGGTTGCTCATCGGCGGCCGGGCGTCGGCCGATCTCGTGCGGACGGGCAGCGACGGGGCCAGCGTCGAGGCGATCTTCGAGAATGAGGGAGAGGAGTTCTTCATCCGCCGTGAAATCACGGCGGAAGGGCGCAGCCGCGCATTCATCAACGGCGTGCTCGCCCCGGCCGCCGCACTCAAGGAGTTGTCGGCGCGGCTCATTGAGATCCACGGTCAGCACGAGCATCAGACGCTCCGCGATTGGTCGACGCACCTCGGCGTGCTCGACACGTTCGGCCAGTTGGAGGCGCTCGTTGTGCCGACCTCGGCGGCCTTTGACGTCATGCGCGCCTCTGAATTGGCGCTCGTCGAGGCGCGTCGCGCCATGTCGGAGCGCGAGACACGCCAGGATCTTCTGACGTTTCAGCTCGCCGAGCTGGATCGCGCGGCCTTGAAGCCGGAGGGTGACGAAGACGTCGAGCTGGCCGCGTTGCGTCAGGTGCTGATGAGTGCCGAGCGGGTCGAGCGGTTGTGCGCCGACAGCTACGCTTCGCTGTACGAGAGCGACGACGCGATTCTGCCCAGACTGGGCGGCGTCTGGCGGCACGTCACCGAACTTGCGACACTGGATCCCAAGTTCCAGCCGTACCTCGACGCGCGCGACGGGATCAAGGCGCAGCTCGAGGACCTCGCGTTGTTTCTGCGCCGCTACGCCGAGACGATTGAGGCCTCGCCGGCGCGCCTCCAGCAGGTCGAGGAACGGCTGGCGCTGCTCGAGCGTCTGAAACGCAAGCACGGTCCGTCTTTGCGTGACGTGATGGACCGCCGTAACGCGCTGAGGAGCGAGCAGCGCGATCTGGAGCGAGGCGAGGATCGGGTCCGCGATCTGGAGGGACAGTTGGCGACGGCCCGCGCCGCGTACGTGGCGGCTGCGGACACCCTCTCGAGGGCGCGACGCCGGACGGCGGGGGAATTCGCCAGCGAGCTCGAGCGTCTGTTGACCGAGCTCGCCATGGCGCGAACACGGTTTGAGGTGCGGTTCGCTGACGAACAGCTTCCAGACACGAGCTGGACGTCGAGAGGATTCGACGCCGCCGAGTTCTTTGTCTCGCCCAATCCGGGAGAGGATCTGCGGCCGCTCGCGCGTATTGTCTCGGGGGGAGAGCTCTCCCGCGTGATGCTGGCGATCAAGACGCTGACGTGTGGGACGCGACTGGCCGGACGGGATGGGGAGCGGGGGAGTCAGTCGCCGGGGCTCGTCTTTGATGAAGTCGATGCGGGCATCGGGGGGAGGGTGGCTGATGTCGTCGGCCGCAAGCTGCGCGCGCTCGGTTCCACGTTTCAGGTGTTGTGCATTACGCACCTGCCGCAGGTTGCGGCGTACGCCGACCGACACATTCGCATCGACAAGCGGGTCGAGTCGCACCGAACATACACGACGGTAAGCCCGCTTGACGGTCAGGGCCGAGTGGAAGAGCTAGCGCGGATGCTGGGCGGTGAAGCCGTGTCGGAGGGCGTCAGGAACGCTGCGCGAGAGATGCTGACCGAGCGCAATGGCGCAGTGTTGCAGGGCGGTGGTCGAACGCGGCCCCCTCGACGCCTCGATACGCCCGTCCCGGGACGACCCCTTCGGCAGGACTCAGGGCAGGCGAAAGGCGAAGACAAGGGGAAAGGCGAAAGCGAAAGAGCACGCTTCCGTTAG
PROTEIN sequence
Length: 602
MLRFLRINQLAVIDSVELELAAGLNVLTGETGTGKSILVEAVGLLIGGRASADLVRTGSDGASVEAIFENEGEEFFIRREITAEGRSRAFINGVLAPAAALKELSARLIEIHGQHEHQTLRDWSTHLGVLDTFGQLEALVVPTSAAFDVMRASELALVEARRAMSERETRQDLLTFQLAELDRAALKPEGDEDVELAALRQVLMSAERVERLCADSYASLYESDDAILPRLGGVWRHVTELATLDPKFQPYLDARDGIKAQLEDLALFLRRYAETIEASPARLQQVEERLALLERLKRKHGPSLRDVMDRRNALRSEQRDLERGEDRVRDLEGQLATARAAYVAAADTLSRARRRTAGEFASELERLLTELAMARTRFEVRFADEQLPDTSWTSRGFDAAEFFVSPNPGEDLRPLARIVSGGELSRVMLAIKTLTCGTRLAGRDGERGSQSPGLVFDEVDAGIGGRVADVVGRKLRALGSTFQVLCITHLPQVAAYADRHIRIDKRVESHRTYTTVSPLDGQGRVEELARMLGGEAVSEGVRNAAREMLTERNGAVLQGGGRTRPPRRLDTPVPGRPLRQDSGQAKGEDKGKGESERARFR*