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RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_12318_33

Organism: Acidobacteria bacterium RIFCSPLOWO2_12_FULL_65_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(38738..39472)

Top 3 Functional Annotations

Value Algorithm Source
Cbr-col-72; C. briggsae CBR-COL-72 protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 244.0
  • Bit_score: 500
  • Evalue 1.00e-138
hypothetical protein; K11294 nucleolin id=12554088 bin=CNBR_ACIDO species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 43.5
  • Coverage: 230.0
  • Bit_score: 161
  • Evalue 1.10e-36
triple helix repeat-containing collagen similarity KEGG
DB: KEGG
  • Identity: 36.7
  • Coverage: 158.0
  • Bit_score: 77
  • Evalue 7.40e-12

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 735
ATGGCCGCGCTGCTCGTGGCGATGAACATCATGGCCATCATGATGACCGTCGCGATGCCGGTGTGGCGGCAGCTGGCACAGCGCGAAAAGGAAGAAGAGCTCATCTTCCGCGGACAGCAGTACGCCCGCGCGGTTGGCCTGTACGAGCGCAAGTACGCAAACGCGCCGCCGCCGAGCATCGACGTCCTGGTCGAGCAGCGCTTCCTCCGCAAGAAGTACAAAGACCCAGTCACGAACGACGATTTCGTGCCGATCACAGCCGTTCAGGCTGCCGCAGCCACCTCACAACCTGGAACCACCGGACGCGTTGGCGGGACCGCCCGGCAACCTGGGGCTCCAGCGGGGGCGGCCACGACGCGTTCTAGCGCTGCGCAGGGCGGCATCACCGGCGTCACGAGCAAGAGCAGCGCCCAGTCGATCCGCGTCTATAACGGCCGCTCGCGTTACAACGAATGGACCTTTGTGTACGCGCCGCCGGCCCCAACGCCGGGCGCCGGCGGGGGGCCTGGGACCGCCACGCCCGGTCAGCGAGGCCAGCCGCAGCGTGGTCAACAAGGACAGTCAGGCAGAGCAGGGGGAGCGGGCAGTCCCTTCGGCCCCGGGGGCCGCGGGGGAGCGGATGGTCGTGGTGGACCCGGCCGCGGCGGACCAGCCGGTCAGCCTGGGACTGGCGGCCGCGGTGGTGCCGTTGGCAATCCTTTCGAGATTCCCCCAACACCGAGGCCTGGACGATGA
PROTEIN sequence
Length: 245
MAALLVAMNIMAIMMTVAMPVWRQLAQREKEEELIFRGQQYARAVGLYERKYANAPPPSIDVLVEQRFLRKKYKDPVTNDDFVPITAVQAAAATSQPGTTGRVGGTARQPGAPAGAATTRSSAAQGGITGVTSKSSAQSIRVYNGRSRYNEWTFVYAPPAPTPGAGGGPGTATPGQRGQPQRGQQGQSGRAGGAGSPFGPGGRGGADGRGGPGRGGPAGQPGTGGRGGAVGNPFEIPPTPRPGR*