ggKbase home page

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_16512_1

Organism: Acidobacteria bacterium RIFCSPLOWO2_12_FULL_65_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(2..358)

Top 3 Functional Annotations

Value Algorithm Source
rplR; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 119.0
  • Bit_score: 231
  • Evalue 5.70e-58
50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 id=12555563 bin=CNBR_ACIDO species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 70.6
  • Coverage: 119.0
  • Bit_score: 165
  • Evalue 2.70e-38
rplR; 50S ribosomal protein L18 similarity KEGG
DB: KEGG
  • Identity: 56.4
  • Coverage: 117.0
  • Bit_score: 139
  • Evalue 5.90e-31

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 357
ATGAAGATCAAGACGAAGGCCGATCGCCGCCATCGCATCCATCTCCGCCAGCGGAAGCGCATCATGGGCTCGAAGGATCGTCCGCGCCTGAGCGTTTTTCGGAGCGTGTCGCACGTCTACGCGCAGGTCATCGACGACATGACCGGACGGACGCTGGTGTCGGCCTCGAGCGTCGAGGGGTCGCTCAAGGACCGGTTTGCCAAGAGCGTGCGCGGCGGCAACGTCAAGGGCGCCGAAGAGGTCGGGAAGGCGATCGCCGAGCGATCGATCGAGAAGGGGATCACGCGCGTCGTGTTCGACCGCAGCGGCTTCCTCTATCACGGGCGCATTCGCGCCGTGGCCGACGCCGCGCGCAAA
PROTEIN sequence
Length: 119
MKIKTKADRRHRIHLRQRKRIMGSKDRPRLSVFRSVSHVYAQVIDDMTGRTLVSASSVEGSLKDRFAKSVRGGNVKGAEEVGKAIAERSIEKGITRVVFDRSGFLYHGRIRAVADAARK