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RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6352_23

Organism: Acidobacteria bacterium RIFCSPLOWO2_12_FULL_65_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(23453..23788)

Top 3 Functional Annotations

Value Algorithm Source
peptidoglycan-binding LysM Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 111.0
  • Bit_score: 227
  • Evalue 1.30e-56
peptidoglycan-binding LysM id=12554009 bin=CNBR_ACIDO species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 54.4
  • Coverage: 68.0
  • Bit_score: 80
  • Evalue 1.10e-12

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 336
GTGATTCCAGGCAGGCACCACAGGTCGGAGCTGCGGATCCATCTCGTGTGGGGCGCGTTCTGGATTTCGGTGTACCTCGGACTGGTGCTCGCGCCGCTTTTCGCGCTGCTCGTGGCATGCCGAGCCTGCCATTCGATCGAGGGCGAGGGCAACACACGGTCTCTCCTGGACGGCGTGGGCAGCCGGTTGACGGAGAAGGAGATTCGCCTGTGGATCGTCGCGCCGCAGCAGATGGATCCAGCCGTGATGAAGCGCGCGCACCAACTGCCGGCCGCCGACCTTGACGCGCTGGTGGCCTATCTGATGGCCGCCAAGTCTCCCGCCAGGCCTCAATGA
PROTEIN sequence
Length: 112
VIPGRHHRSELRIHLVWGAFWISVYLGLVLAPLFALLVACRACHSIEGEGNTRSLLDGVGSRLTEKEIRLWIVAPQQMDPAVMKRAHQLPAADLDALVAYLMAAKSPARPQ*