ggKbase home page

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_17637_3

Organism: Acidobacteria bacterium RIFCSPLOWO2_12_FULL_65_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(1995..3029)

Top 3 Functional Annotations

Value Algorithm Source
hrcA; Heat-inducible transcription repressor HrcA; K03705 heat-inducible transcriptional repressor Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 344.0
  • Bit_score: 656
  • Evalue 1.60e-185
hrcA; heat-inducible transcription repressor HrcA; K03705 heat-inducible transcriptional repressor id=12555187 bin=CNBR_ACIDO species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 49.4
  • Coverage: 346.0
  • Bit_score: 309
  • Evalue 4.40e-81
HrcA family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 39.7
  • Coverage: 345.0
  • Bit_score: 241
  • Evalue 4.20e-61

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1035
ATGGAAGACAACCAACGGTCCAAACGCGTGCTGGCCGCGCTCGTGCGCGAATATATCGCCTCGGGCGAGCCCGTCGCCTCTTCGCTGCTGGTCACCGCGGCCGGGCTCGGCGTCTCGTCAGCGACCGTGCGGAACATCCTGGCGCGGCTCGAAGGCGAAGGCTTCGTCGAGCAGCCGCACACTTCGGCCGGTCGCGTCCCGACCTCGCGGGGATACCGGTTCTACGTCGATCTGCTGCTCGGACAACGGCGCACCCTCCGGACGGCCAACGTCCTTGAGGCGCGCCTGCGGCGCGACGGATCCGGCACGGCCATTGACGCCTTGCTCCCGCAGGTCTCGCACGTGCTCTCGCAGGCGTTGCGCGGCGTCGGCTTCGCCCTGCGCCCGGCGCACGAGGCGGCCGTGTTCGAGCGCGTCGAGTTCGTCCCGCTTGGCGCGGCTCGCGTGCTGGTCGTCATCGTCGCCCGCGGCGGGCATGTGCTTCAGAAGGTCATCGATCTCGGCGAGCCGATCTCTGCCGACGATCTGCGGCAGGCGGCGAATTATCTCAACGAAGAATTCTCCGGGCTGCCCCTGCACCGCGCCCGCGAGGCGGTGCTCGAGCGGATCAACGAGGAGCGGCTCCTGTACGATGTCTTGCTCGCGCGCGCCATGCGCCTGGCGAACTCGACCTTCGCGGATCTTCCGGACGAGCGCGCCATCTATGTCGAAGGCACCGCGTCGCTTCTAGACGCCGCGCCCGAGCTGACGCTCGACACGCTGCAGGCGCTGATCCTGATGATCGAGGAGAAACAGCAGCTCGTCCGCCTGCTCAACGAATACATCGACGGTCCCGGCCTGACCATCGTGATCGGCGCCGAGCATCTGGATCCGCACCTGCGACCATTCAGCCTCATTGCCTCGACCTACGACGATGGGAGCGGCGTCGGTACGGTCGGGGTTATCGGCCCCACGCGCATGCGGTATCCGCGCGCCATTGCCGCCGTCGAGGGCGCCGCGCAGGCGATGTCGCGGGTCCTGCGCGACCAGAACTAA
PROTEIN sequence
Length: 345
MEDNQRSKRVLAALVREYIASGEPVASSLLVTAAGLGVSSATVRNILARLEGEGFVEQPHTSAGRVPTSRGYRFYVDLLLGQRRTLRTANVLEARLRRDGSGTAIDALLPQVSHVLSQALRGVGFALRPAHEAAVFERVEFVPLGAARVLVVIVARGGHVLQKVIDLGEPISADDLRQAANYLNEEFSGLPLHRAREAVLERINEERLLYDVLLARAMRLANSTFADLPDERAIYVEGTASLLDAAPELTLDTLQALILMIEEKQQLVRLLNEYIDGPGLTIVIGAEHLDPHLRPFSLIASTYDDGSGVGTVGVIGPTRMRYPRAIAAVEGAAQAMSRVLRDQN*