ggKbase home page

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_17637_5

Organism: Acidobacteria bacterium RIFCSPLOWO2_12_FULL_65_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(4281..6659)

Top 3 Functional Annotations

Value Algorithm Source
penicillin-binding protein 1A; K05365 penicillin-binding protein 1B [EC:2.4.1.129 3.4.-.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 792.0
  • Bit_score: 1562
  • Evalue 0.0
penicillin-binding protein 1A; K05365 penicillin-binding protein 1B [EC:2.4.1.129 3.4.-.-] id=12555188 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 51.7
  • Coverage: 787.0
  • Bit_score: 748
  • Evalue 6.50e-213
penicillin-binding protein 1A similarity KEGG
DB: KEGG
  • Identity: 38.1
  • Coverage: 819.0
  • Bit_score: 511
  • Evalue 5.00e-142

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 2379
GTGACCACGACCAAACGCGGCAAGCCGGCAAAAGGTCTGCGGCTGAAGATCCCGGTCGCCAAGTGGTGGCGTAAGCGGTGGGTGCGCGCAACGGCGCTCGTGCTCGCGATCCCGGTGGTCGTCGGCTGTTTTGCAGCCGGGTACTTCTACATCAACGTGACCCAGCTGATTGACGCGCGCCTGCGCGGCGAGCGCGACACGGTCTTTCCCCGTGTGTTCGCCCGTCCGCTCGAACTGCGGGTTGGTCAGTCGCTCACCGAACGACAGCTCGTCGATCGGCTGAACGACCTTGGCTACGCCCAGCGGCCTCGGGTCGAGCAGCTTGGCGAGTTTGCCATCCTCGGCGGGAACGTGTCCATCAAGCCCAGAGGACCCGAGTTCAAGGGCCAGGTCGTCCGGGTGGTCTTTCAGCGTCCGGGCCCGCGCCGATCGCCGTCCGCGCGTCCCTCCGATCGGGTCCTGGGGCTCGAGCTCGGCACGCGCGCGCGCGACAGCGTCACGCTTGACGCGCCAGTCCTGACGTCGCTCGTCAACGGCGAGCGGGAGAAGCGCCGGCCCGTGGCCCTGTCGGTCATCCCGCCGCACATGGTGCAGGCGGTGCTCGCCATCGAGGATCGCCGGTACTACGAGCATCCCGGCATCGATCCGATTGGCATCGGCGGCGCGATTTTCTCGTACGCCATCGGCAGGCGCGACTACCTGGCGGGCGGCAGCACCATCACCCAGCAGCTGGTCCGCAACGTGTTTCTGCCGAACTATCGCGGCATGACGCTGCAGTCGGCGCGCGCACGGTCGGTCCGGCGCAAGCTCCTCGAGGTGTTTGTCTCGATCGTGCTCACCAGCCGCGCCTCGAAGGACGAGATTCTCGAGATGTATCTGAATGGCATCCCGCTCGGTCAGCGCGGATCGTTCGCCATCGTCGGCGTCGCCGAAGCCTCGCGCCTCTTTTTCGGCAAAGACATGAGCAACGTCTCGCTGGCCGAGGCCGCGATGATCGCCGGCGTCATTCAACAACCGTCGGCGCTCTCGCCCTTCAACAATCCCGCCGGCTCCAAAGGGCGCAGAAACGTCGTGCTCCAGGCGATGGCCGATGCCGGCTACATCACGTCGGAGGAAGCGGATCGCGCCGCCCGCGATCCGCTCACGCTCGTGCCGCGCGCGCTCGAGGCCGAAGCACCGCACTTTGTCGACTTCGTGGACCAGACGCTCGACGAACAGTACCCGGGGCTCACGACGACCGCCACGCTCTCTGTCGACGTCTACACCACGCTCGACCTCCACCTCCAGCGCGTCGCACAGGACGCCGTAAGAAGCGGGCTGACCAACGTCGACCAGCTGCTCTCGCGGCGACGGCGCCGGGGCCAGGCCGAGGCGGCACTGGTCGCCGTCGACCCGAAGACCGGCGAGATTCTGGCGCTCGTCGGCGGGCGCTCCTACAACCAGTCCCAGTACAACCGCGCGACCGTGTCGCGGCGCCAGCCGGGCTCGGTGTTCAAGCCCTTCGTGTATCTGACGGCGTTCGAGCAGGCGGCTGCCCTGGGCCTCACCAACGTCACACCGGCCACCATCATTAACGACGAGCCCGAGACCTTCGAGTTCGATGGCAAGACGTGGACGCCGGAGAACTACGAGAAGACGTACGACGGCCCGGTCACCTTCCGGCACGCGCTCGCCCACTCCCGCAATCTGGCGACGATCCACGTGGCCCAGATGGCAGGGTACGAGAACGTCGCCGATTTCTGGAAGGGGCTCGGCGTCGGCAGTCCGCCCCGCCCGTTTCCCTCGATCGCGCTTGGGGTCTTCGAGGCGACACCGTACGAGATCGCCACGGCGTACACGCTGTTTCCGAATCTCGGCACCATCCGGCCGCTCAAGCACATCCTCAAGATCAACCGCGGCGGTCGCGACGTGACCAAGCCGGTGTCCGCACAGCCGCGGGCCGTCGCGCGTCCAGACACGACGTTTCTCATCACCGACATGCTGCGCGCCGTGATCAACGAGGGGACGGGCGCGGGCGTGCGGGGCGCCGGATTCGCCCTCGAGGCTGCCGGCAAGACCGGCACGACCAACGATCTGCGCGACGCGTGGTTTGTCGGGTTCACGCCCGAGATTCTCACGGTCGTGTGGGTGGGGTTTGACGACAATCAGCCGCTCGGCCTGAGCGGGGCGCAGGCCGCACTTCCCATCTGGGCCGAGTTCATGCGGCGCGCGCTCGCCGGCTACGGCAGCGTGCCGTTTGCGGTGCCGGCAGGCGTGCACTTCGTCAACATCGACCCGCAGACCGGTCAGCTGGCCACGCCTGAATGTCCCCGCATCGTCAGCTCGGCATTTCTCACCAACACGGAGCCGACCGAGTTCTGCGCGCTCCATCAACCCTAA
PROTEIN sequence
Length: 793
VTTTKRGKPAKGLRLKIPVAKWWRKRWVRATALVLAIPVVVGCFAAGYFYINVTQLIDARLRGERDTVFPRVFARPLELRVGQSLTERQLVDRLNDLGYAQRPRVEQLGEFAILGGNVSIKPRGPEFKGQVVRVVFQRPGPRRSPSARPSDRVLGLELGTRARDSVTLDAPVLTSLVNGEREKRRPVALSVIPPHMVQAVLAIEDRRYYEHPGIDPIGIGGAIFSYAIGRRDYLAGGSTITQQLVRNVFLPNYRGMTLQSARARSVRRKLLEVFVSIVLTSRASKDEILEMYLNGIPLGQRGSFAIVGVAEASRLFFGKDMSNVSLAEAAMIAGVIQQPSALSPFNNPAGSKGRRNVVLQAMADAGYITSEEADRAARDPLTLVPRALEAEAPHFVDFVDQTLDEQYPGLTTTATLSVDVYTTLDLHLQRVAQDAVRSGLTNVDQLLSRRRRRGQAEAALVAVDPKTGEILALVGGRSYNQSQYNRATVSRRQPGSVFKPFVYLTAFEQAAALGLTNVTPATIINDEPETFEFDGKTWTPENYEKTYDGPVTFRHALAHSRNLATIHVAQMAGYENVADFWKGLGVGSPPRPFPSIALGVFEATPYEIATAYTLFPNLGTIRPLKHILKINRGGRDVTKPVSAQPRAVARPDTTFLITDMLRAVINEGTGAGVRGAGFALEAAGKTGTTNDLRDAWFVGFTPEILTVVWVGFDDNQPLGLSGAQAALPIWAEFMRRALAGYGSVPFAVPAGVHFVNIDPQTGQLATPECPRIVSSAFLTNTEPTEFCALHQP*