ggKbase home page

RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_rifcsplowo2_12_scaffold_360064_2

Organism: Bacteroidetes bacterium RIFCSPLOWO2_12_FULL_31_6

near complete RP 44 / 55 MC: 3 BSCG 43 / 51 MC: 5 ASCG 9 / 38 MC: 3
Location: comp(1532..2437)

Top 3 Functional Annotations

Value Algorithm Source
xerD; site-specific recombinase; K04763 integrase/recombinase XerD Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 301.0
  • Bit_score: 590
  • Evalue 1.60e-165
Tyrosine recombinase xerC id=3380050 bin=GWF2_Bacteroidetes_35_48 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81 similarity UNIREF
DB: UNIREF100
  • Identity: 67.7
  • Coverage: 300.0
  • Bit_score: 412
  • Evalue 4.20e-112
integrase similarity KEGG
DB: KEGG
  • Identity: 61.7
  • Coverage: 300.0
  • Bit_score: 391
  • Evalue 1.70e-106

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 906
GTGAATTGGGTATCGACAATAAAAGGGTTTAAAAATTATTTACAATTAGAACGCTCGTTGTCTAAAAATTCTATCGAAGCCTACTTGCACGATGTAGAAAAATTTTTTCAGTTTTTAGATTTAAAAGGAATAGACATTCAACCAGAAAAAGTAGCACAAAATCACATTGAAGAATTTTTGATGTGGATTAGTGAGTTAGGATTAAATGCACGTTCTCAAGCCAGAATATTATCTGGTTTAAAAGCTTTCTACAAATATTTAATGATGGAAGATATTATAAATAATTCTCCAGCAGAATTAATAGAATCTCCTAAAATTGGGCGAAAATTACCTGAGGTATTAAGTATAGAAGAGATTAACGAAGTAATAAATGCCATTGATTTAAGTAAGCCCGAAGGCGAACGAAATAAAGCAATGCTGGAAACTCTTTACAGTTGTGGTTTACGTGTTACCGAGTTGATTAATTTAAAATTATCTAATTTATTGTTAGACGAAGGTTTTGTGCGTGTAATAGGAAAAGGTGATAAAGAACGAATTACTCCAATTGGAAGTATTGCCATAAAACAAATTAAAATTTATGTGGAGAGTAAGCGCAATCACATGAATAACATTGAAAAAAAAAGTGAAGATATTTTGTTTTTAAACCGTAGAGGAAAACAATTAACTCGGGTAATGATTTTTACGATTATTAAAAATTTAGCTCAAAAAGCTGGAATTAAAAAAATAATTAGTCCACATACTTTCCGACATTCTTTTGCCACCCATTTGGTGGAAGGTGGAGCAGATTTAAGAGCAGTGCAAGAAATGTTAGGACACGAATCCATCACCACTACCGAAATTTATACACATTTAGATAGAGAATACCTGCGACAAGCAATTTTAGATTTTCATCCGAGAGCTAAATAA
PROTEIN sequence
Length: 302
VNWVSTIKGFKNYLQLERSLSKNSIEAYLHDVEKFFQFLDLKGIDIQPEKVAQNHIEEFLMWISELGLNARSQARILSGLKAFYKYLMMEDIINNSPAELIESPKIGRKLPEVLSIEEINEVINAIDLSKPEGERNKAMLETLYSCGLRVTELINLKLSNLLLDEGFVRVIGKGDKERITPIGSIAIKQIKIYVESKRNHMNNIEKKSEDILFLNRRGKQLTRVMIFTIIKNLAQKAGIKKIISPHTFRHSFATHLVEGGADLRAVQEMLGHESITTTEIYTHLDREYLRQAILDFHPRAK*