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RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_rifcsplowo2_12_scaffold_121768_3

Organism: Bacteroidetes bacterium RIFCSPLOWO2_12_FULL_31_6

near complete RP 44 / 55 MC: 3 BSCG 43 / 51 MC: 5 ASCG 9 / 38 MC: 3
Location: 1546..2103

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YCU2_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 33.7
  • Coverage: 178.0
  • Bit_score: 120
  • Evalue 1.60e-24
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 185.0
  • Bit_score: 373
  • Evalue 1.90e-100
RNA polymerase, sigma-24 subunit, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 36.2
  • Coverage: 188.0
  • Bit_score: 116
  • Evalue 8.30e-24

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Taxonomy

RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 558
GTGAGTAGTCCGATTGAAGAAACATATAAATTAAAAACATTGAACCGTAATGAGTTTATCACGGTGATATACAACAGGTATGGCAAAAAATTATATACCTACGCAATACGCACATGGAATCTGGACGAAGATGCAGCCTGGGATCTTATTTATAAAACACTTTATAAAGTAATTGATAGTTACACGAATTATGAGTTTGCATCTGAAGAAAAATTTGCTTCGTTTGTTTTCAAAATATTCATCAATTACCTGAGAAATTATTATCGTGATAATAAAGAAAATAAAATGTTTGAGTTCAGTGCGATGGATGATGTTGATCTAAGCACGAAAGAAACCAAAGCAGAAGAAGAGATCATAACGAACAAGAAATTAATTGCATTGAATGATGTATTGGATAAACTGGAAGATTGGGAGAGAATGCTTTTATTAATGCGAAGTGAAGGAAGAGCTTACTCAGAAATCGCACAATATATAGATAAGCCCGAAAATCAATTGAAAGTTTATTACCAACGCTTGAAAGAACAAATTCAAAAAAAATTAAATGACCGATCAGAATAA
PROTEIN sequence
Length: 186
VSSPIEETYKLKTLNRNEFITVIYNRYGKKLYTYAIRTWNLDEDAAWDLIYKTLYKVIDSYTNYEFASEEKFASFVFKIFINYLRNYYRDNKENKMFEFSAMDDVDLSTKETKAEEEIITNKKLIALNDVLDKLEDWERMLLLMRSEGRAYSEIAQYIDKPENQLKVYYQRLKEQIQKKLNDRSE*