ggKbase home page

RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_rifcsplowo2_12_scaffold_93030_2

Organism: Bacteroidetes bacterium RIFCSPLOWO2_12_FULL_31_6

near complete RP 44 / 55 MC: 3 BSCG 43 / 51 MC: 5 ASCG 9 / 38 MC: 3
Location: comp(1079..1516)

Top 3 Functional Annotations

Value Algorithm Source
two component, sigma54 specific, transcriptional regulator, Fis family Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 145.0
  • Bit_score: 287
  • Evalue 1.10e-74
Response regulator receiver protein id=1934759 bin=GWE2_Bacteroidetes_29_8 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_29_8 organism_group=Bacteroidetes organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 33.8
  • Coverage: 133.0
  • Bit_score: 89
  • Evalue 2.30e-15
two component, sigma54 specific, transcriptional regulator, Fis family similarity KEGG
DB: KEGG
  • Identity: 36.4
  • Coverage: 121.0
  • Bit_score: 66
  • Evalue 1.00e-08

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 438
ATGAATAAACAATCATTTCTGATATATATTATTGATGACGATATGGTTTTTTCAAGATCTATTTCTTATCAGTTAACTAAAAACTTACCTCGAAATATTAATATTAAGGTTTTTGCAAGTTTTGATGAATTTATGCTTAATACCAAACAAAAGCCGGATGTAGTTATTCTAGATTACTATCTAAAAAACAAAGACAGTTTAGATGGTATTGTTTTACTTCAAAAAATAAAGCAAGTACTTAATGATACTGATGTTGTTATACTCGCAGGAGAATCAAGCATTGAAATGGCCCTTGAAACTTTTAAGAATGGTGCTTATGATTTTATTCGAAAAAATGATGCCGTTTTTTTAAGAATAAAATATACTATTGAATTTATACTTGATAGGTATAAAGAAAAACAAGCTTCCACAAATCATTATTATAATGGTAAAAGCTAA
PROTEIN sequence
Length: 146
MNKQSFLIYIIDDDMVFSRSISYQLTKNLPRNINIKVFASFDEFMLNTKQKPDVVILDYYLKNKDSLDGIVLLQKIKQVLNDTDVVILAGESSIEMALETFKNGAYDFIRKNDAVFLRIKYTIEFILDRYKEKQASTNHYYNGKS*