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RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_rifcsplowo2_12_scaffold_26978_1

Organism: Bacteroidetes bacterium RIFCSPLOWO2_12_FULL_31_6

near complete RP 44 / 55 MC: 3 BSCG 43 / 51 MC: 5 ASCG 9 / 38 MC: 3
Location: 193..1056

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 70 subunit, RpoD subfamily n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBQ1_FLUTR similarity UNIREF
DB: UNIREF100
  • Identity: 80.2
  • Coverage: 288.0
  • Bit_score: 458
  • Evalue 3.80e-126
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 287.0
  • Bit_score: 550
  • Evalue 1.70e-153
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 80.2
  • Coverage: 288.0
  • Bit_score: 458
  • Evalue 1.10e-126

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Taxonomy

RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 864
ATGAGGCAATTAAAAATCACCAAATCTATTACCAACCGTGATAGTGCATCTTTAGATAAATATTTACAGGAAATTGGAAGAGAAGAATTAATAACAGCCGAAGACGAAGTAGAATTAGCTCAGAAAATTAGACAAGGAGATCAAAAAGCACTCGAAAAATTAGTAAAAGCAAATCTTAGATTTGTTGTATCAGTATCCAAACAATATCAAAACCAAGGACTTACCTTACCCGATTTAATCAACGAAGGAAACTTAGGTTTGATAAAAGCTGCACAACGATTTGATGAAACAAGAGGTTTTAAATTTATCTCTTATGCGGTATGGTGGATTCGTCAATCCATTTTACAAGCAATCGCTGAACAAGCAAGAATAGTTCGTTTACCATTAAATCAGGTTGGTTCATTAAATAGAATAAACAAAGCTTTTTCTAGGTTAGAACAAGAATTTGAAAGAGAGCCATCTGCTGATGAAATTGCTGAATCGCTAGAAATAGATGAATCTAAAGTAACCGAATCTCAAAAAATATCTGGACGACATGTCTCCATGGATGCTCCCTTTAAAGATGGAGAAGATGGTACTTTGCTAGATGTATTATCAAATGGTAATTCACCAAAAGCAGACATTAGTTTATTAAACGAATCATTACAAAAAGAAATAGATAGGTCTTTATCTACTTTAACAGAAAGAGAAAGAGATGTAATTAAATTATTTTTTGGAATAGCAATTCCACATCCCCTCTCTTTAGAAGAAATTGGAGAAAAATTTGACTTAACTCGAGAACGTGTTAGACAAATTAAAGAAAAAGGCATTAGAAGACTAAGACATTCATCAAGAAGTAAATTATTAAAATCATATTTAGGATAA
PROTEIN sequence
Length: 288
MRQLKITKSITNRDSASLDKYLQEIGREELITAEDEVELAQKIRQGDQKALEKLVKANLRFVVSVSKQYQNQGLTLPDLINEGNLGLIKAAQRFDETRGFKFISYAVWWIRQSILQAIAEQARIVRLPLNQVGSLNRINKAFSRLEQEFEREPSADEIAESLEIDESKVTESQKISGRHVSMDAPFKDGEDGTLLDVLSNGNSPKADISLLNESLQKEIDRSLSTLTERERDVIKLFFGIAIPHPLSLEEIGEKFDLTRERVRQIKEKGIRRLRHSSRSKLLKSYLG*