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RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_330

Search features with annotation key words

Displaying items 91-120 of 139 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_330_91
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(102201..102521)
DNA (321bp) protein (107aa)
DsrE family protein; K06039 uncharacterized protein involved in oxidation of intracellular sulfur Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Putative uncharacterized protein id=4954738 bin=GWC2_OP3-like_45_7 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
hypothetical protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_330_92
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(102518..103096)
DNA (579bp) protein (193aa)
methyltransferase type 11 Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
methyltransferase type 11 id=124977 bin=ACD79 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
methyltransferase type 11
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_330_93
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(103080..103421)
DNA (342bp) protein (114aa)
regulatory protein ArsR; K03892 ArsR family transcriptional regulator Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Regulatory protein ArsR id=1778323 bin=GWB2_Proteobacteria_55_19 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
regulatory protein ArsR
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_330_94
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

103526..103888
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UM76_9FLAO
Uncharacterized protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_330_95
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(103977..104984)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XUU3_SORCE
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypothetical protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_330_96
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

105267..105521
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EGE9_9BACT
Uncharacterized protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_330_97
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

105511..105744
DNA (234bp) protein (78aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_330_98
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

106197..106466
DNA (270bp) protein (90aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_330_99
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

106463..106699
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Cloacimonetes bacterium SCGC AAA252-N05 RepID=UPI0003804B2F
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypothetical protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_330_100
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

106968..108374
DNA (1407bp) protein (469aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E4M5_GEOLS
Fis family two component sigma-54 specific transcriptional regulator Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Fis family two component sigma-54 specific transcriptional regulator
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_330_101
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(108887..109630)
DNA (744bp) protein (248aa)
PROKAR_LIPOPROTEIN Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
PROKAR_LIPOPROTEIN id=5097295 bin=PER_GWF2_39_17 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=PER_GWF2_39_17 organism_group=PER (Peregrinibacteria)
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_330_102
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(109735..110508)
DNA (774bp) protein (258aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_330_103
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(110575..111816)
DNA (1242bp) protein (414aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_330_104
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(111875..113116)
DNA (1242bp) protein (414aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_330_105
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

113323..115128
DNA (1806bp) protein (602aa)
Beta-galactosidase n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0KB15_HALHC
beta-galactosidase Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
beta-galactosidase
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_330_106
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

115231..116130
DNA (900bp) protein (300aa)
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Uncharacterized protein id=4414084 bin=GWC2_Planctomycete_KSU_39_26 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
hypothetical protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_330_107
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

116171..116593
DNA (423bp) protein (141aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_330_108
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

116668..117258
DNA (591bp) protein (197aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_330_109
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

117352..118650
DNA (1299bp) protein (433aa)
SAM-dependent methyltransferase, putative n=2 Tax=Geobacter metallireducens RepID=Q39S93_GEOMG
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
SAM-dependent methyltransferase
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_330_110
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

118631..119695
DNA (1065bp) protein (355aa)
radical SAM family protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Radical SAM domain protein id=3959260 bin=GWC2_Elusimicrobia_51_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Elusimicrobia_51_8 organism_group=Elusimicrobia
radical SAM domain iron-sulfur cluster-binding oxidoreductase
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_330_111
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(119714..120061)
DNA (348bp) protein (116aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_330_112
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

120145..123168
DNA (3024bp) protein (1008aa)
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
mfd; transcription-repair-coupling factor (TRCF) (ATP-dependent helicase mfd) (EC:3.6.1.-) id=14625927 bin=bin7_NC10_sister species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
transcription-repair coupling factor
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_330_113
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(123195..123512)
DNA (318bp) protein (106aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_330_114
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(123487..124173)
DNA (687bp) protein (229aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_330_115
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

124262..124711
DNA (450bp) protein (150aa)
nucleotide pyrophosphohydrolase; K02499 tetrapyrrole methylase family protein / MazG family protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
MazG family protein id=1891935 bin=GWE2_RBX1_39_32 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
nucleotide pyrophosphohydrolase
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_330_116
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

124701..126509
DNA (1809bp) protein (603aa)
ATP-dependent metalloprotease FtsH (EC:3.6.4.3); K03798 cell division protease FtsH [EC:3.4.24.-] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=uncultured candidate division JS1 bacterium RepID=G3BMN0_9BACT
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_330_117
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

126561..127421
DNA (861bp) protein (287aa)
putative formiminotransferase-cyclodeaminase (EC:2.1.2.5 4.3.1.4); K13990 glutamate formiminotransferase / formiminotetrahydrofolate cyclodeaminase [EC:2.1.2.5 4.3.1.4] id=5091475 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
glutamate formiminotransferase Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
glutamate formiminotransferase
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_330_118
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

127765..128088
DNA (324bp) protein (108aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_330_119
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

128092..129315
DNA (1224bp) protein (408aa)
Sigma-54 interaction domain protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8EWB0_9DELT
acetoacetate metabolism regulatory protein AtoC; K07714 two-component system, NtrC family, response regulator AtoC Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
acetoacetate metabolism regulatory protein AtoC
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_330_120
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(129419..129814)
DNA (396bp) protein (132aa)
RNA binding protein (S1 domain) n=4 Tax=Anoxybacillus RepID=B7GFJ0_ANOFW
yabR; RNA binding protein (S1 domain); K07571 S1 RNA binding domain protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
yabR; RNA binding protein (S1 domain)
Displaying items 91-120 of 139 in total

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