ggKbase home page

RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_634_14

Organism: Deltaproteobacteria bacterium RIFOXYD12_FULL_56_24

near complete RP 46 / 55 MC: 1 BSCG 48 / 51 ASCG 12 / 38 MC: 1
Location: comp(10897..12159)

Top 3 Functional Annotations

Value Algorithm Source
type III restriction protein res subunit; K01153 type I restriction enzyme, R subunit [EC:3.1.21.3] Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 420.0
  • Bit_score: 824
  • Evalue 9.10e-236
restriction endonuclease subunit R similarity KEGG
DB: KEGG
  • Identity: 89.2
  • Coverage: 399.0
  • Bit_score: 717
  • Evalue 3.20e-204
Type III restriction protein res subunit id=1935625 bin=GWD2_Nitrospirae-related_57_8 species=Chlorobium limicola genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits similarity UNIREF
DB: UNIREF100
  • Identity: 87.0
  • Coverage: 399.0
  • Bit_score: 711
  • Evalue 4.70e-202

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1263
ATGCCAGATAAAGAAGCCACAGCCAGGATTAAGATCAACAAACTGCTCGAAACGGCTGGCTGGCGCTTTTTTCCAGAGGGAAGCTCCCCCGCGAACATCTGCCTCGAACCCAGCATTACCATCAAATCATCCGATCTGGATGTCCTTGGAGAGAACTTCGAAAAGACCGGCAAGGGCTTCATCGACTTCCTGCTCCTCGACGCCAAAGGCTTCCCGCTCATCGTCCTTGAGGCCAAATCGGAAGACAAAAACCCGCTGGTCGGCAAGGAACAGGCCCGCAAATACGCCAAGTCGCTGAATTGCCGCTTCGTCATCCTTTCCAACGGCAACCTGCACTACTTCTGGGATCTGGAACGCGGCAATCCCTACCTCATTACCTCCTTTCCCACCCCGGACTCGGTGATCGGATACCAGAAGGTTTTGCCCAACCCGCAACGGCTCGTCGAGGAACGAGTCGCTGACGACTACATCGTCCTGACCCAGCGCCCGAACTACCAAGCCGAAGCGGCGTGGCGCAATGAGGCGGAACGGCCCGGCTACATCCAGACCAACAAGCTGCGCTTCCTGCGCCCCTATCAGTTGCAGGCTGTTCACGCTCTGCAACGGGCGGTAAAGGAGGACCATGACCGTTTTCTCTTCGAAATGGCCACCGGCACCGGCAAGACCCTGACCGCTGCCGCCGTCATCAAACTCTTCCTGCGTACCGGCAATGCCCGGCGCGTCCTCTTTCTGGTGGATCGCCTCGAACTGGAGGATCAGGCCAAGAAGGCCTTCAGCGCGCTGCTCTCCGCCGATTTCCAGACGGTGATCTACAAGGAGAACCGCGATGACTGGCGGCGGGCCGAGATAGTGGTCACCACCGTGCAATCACTGCTTTTCAACAACAAGTACCAGCGGCTTTTCTCGCCGACCGACTTCGATCTGGTCATCTCCGACGAGGCCCACCGCTCCATCGGCGGCAACGCCCGCGCAGTCTTCGACTACTTCATCGGCTACAAACTCGGCCTCACCGCCACCCCACGCGACTACCTCAGGCGCTTCGACAAAGCCGCCCCCACCTCCCGCGACCCGCGCGAGGCCGAACGCCGCCTGCTGCTGGACACCTACCGCACCTTCGGCTGCGAGAACAGCCAGCCCACCTACCGCTACTCGCTGCTCGACGGGGTGAAGGACGGCTTTTTGATCAATCCCACGGTGGnnnnnnnnnnnnnnnnnnnnnnnnnnnnCAGCCCACCTACCGCTACTCGCTGCTCGACGGGGTGA
PROTEIN sequence
Length: 421
MPDKEATARIKINKLLETAGWRFFPEGSSPANICLEPSITIKSSDLDVLGENFEKTGKGFIDFLLLDAKGFPLIVLEAKSEDKNPLVGKEQARKYAKSLNCRFVILSNGNLHYFWDLERGNPYLITSFPTPDSVIGYQKVLPNPQRLVEERVADDYIVLTQRPNYQAEAAWRNEAERPGYIQTNKLRFLRPYQLQAVHALQRAVKEDHDRFLFEMATGTGKTLTAAAVIKLFLRTGNARRVLFLVDRLELEDQAKKAFSALLSADFQTVIYKENRDDWRRAEIVVTTVQSLLFNNKYQRLFSPTDFDLVISDEAHRSIGGNARAVFDYFIGYKLGLTATPRDYLRRFDKAAPTSRDPREAERRLLLDTYRTFGCENSQPTYRYSLLDGVKDGFLINPTVXXXXXXXXXXSPPTATRCSTG*