ggKbase home page

RIFOXYD12_FULL_Deltaproteobacteria_56_24_rifoxyd3_full_scaffold_280_32

Organism: Deltaproteobacteria bacterium RIFOXYD12_FULL_56_24

near complete RP 46 / 55 MC: 1 BSCG 48 / 51 ASCG 12 / 38 MC: 1
Location: comp(45449..45826)

Top 3 Functional Annotations

Value Algorithm Source
PilT protein domain protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G897_GEOUR similarity UNIREF
DB: UNIREF100
  • Identity: 70.4
  • Coverage: 125.0
  • Bit_score: 186
  • Evalue 1.60e-44
PilT domain-containing protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 125.0
  • Bit_score: 252
  • Evalue 3.30e-64
PilT domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 70.4
  • Coverage: 125.0
  • Bit_score: 186
  • Evalue 4.40e-45

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 378
ATGCTGATTGATACCGATGTGCTCATCTGGTACATGCGAGGGAACACAAAGGCATTAGATGAATTAGCAAAGCATAAAAGCTTTTCTATTTCCGTCGTTACCTACATGGAACTAGTCCAAGGAATGAGAAACAATAATGAATTAACAGCACTCCGCAAGGCCTTAAAGAGCTGGAACTGCAATATTATCTACATAAGTGAAGAAATCTCAAGCAAAGCCATGTTCTATGTTGAACAGCACTACCTGAGCCACTTCATGCAAATTGCCGACGCATTAATTGGTGCCACAGCAGCATCTTACGGAATGCCATTATTAACAGGCAACGACAAACACTACAAAATCGTCAAAGAAATCGCCTTAAAGAAATTTCGGCCATAA
PROTEIN sequence
Length: 126
MLIDTDVLIWYMRGNTKALDELAKHKSFSISVVTYMELVQGMRNNNELTALRKALKSWNCNIIYISEEISSKAMFYVEQHYLSHFMQIADALIGATAASYGMPLLTGNDKHYKIVKEIALKKFRP*