ggKbase home page

Omnitrophica WOR_2 bacterium RBG_13_44_8b

RBG_13_unknown_42_1
In projects: RBG_13  |  2500-genomes  |  2500-curated-genomes  |  2500-curated-genomes-non-redundant  |  rifle_organic_carbon  |  rifle-organic-carbon-non-redundant  |  ggdb

Consensus taxonomy:

Displaying items 51-100 of 113 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
RBG_13_OP3_44_8_RBG_13_scaffold_7824 15 13895 bp 41.35 1.00 76.37
RBG_13_OP3_44_8_RBG_13_scaffold_10190
Species: marine sediment metagenome (50%)
16 10254 bp 40.87 1.00 76.57
RBG_13_OP3_44_8_RBG_13_scaffold_9644 9 7229 bp 41.17 1.00 76.73
RBG_13_OP3_44_8_RBG_13_scaffold_40007 6 5680 bp 39.21 1.00 77.43
RBG_13_OP3_44_8_RBG_13_scaffold_6657 21 18127 bp 43.17 1.00 77.45
RBG_13_OP3_44_8_RBG_13_scaffold_3503 27 22206 bp 42.10 1.00 77.51
RBG_13_OP3_44_8_RBG_13_scaffold_27358 11 10982 bp 41.43 1.00 77.55
RBG_13_OP3_44_8_RBG_13_scaffold_11584 29 21305 bp 41.22 1.00 78.53
RBG_13_OP3_44_8_RBG_13_scaffold_11987 14 14957 bp 41.97 1.00 78.71
RBG_13_OP3_44_8_RBG_13_scaffold_2273 49 48892 bp 42.73 1.00 78.87
RBG_13_OP3_44_8_RBG_13_scaffold_10450 9 14040 bp 44.59 1.00 79.72
RBG_13_OP3_44_8_RBG_13_scaffold_39557 7 5451 bp 42.98 1.00 80.35
RBG_13_OP3_44_8_RBG_13_scaffold_19786 4 5036 bp 43.65 1.00 80.72
RBG_13_OP3_44_8_RBG_13_scaffold_6161 11 9465 bp 41.76 1.00 80.98
RBG_13_OP3_44_8_RBG_13_scaffold_11560 10 10511 bp 43.30 1.00 81.09
RBG_13_OP3_44_8_RBG_13_scaffold_5847 10 10007 bp 38.82 1.00 81.18
RBG_13_OP3_44_8_RBG_13_scaffold_1610 24 17073 bp 40.47 1.00 81.32
RBG_13_OP3_44_8_RBG_13_scaffold_18323 3 5025 bp 43.74 1.00 81.61
RBG_13_OP3_44_8_RBG_13_scaffold_5242 11 12037 bp 42.85 1.00 81.62
RBG_13_OP3_44_8_RBG_13_scaffold_1510 31 30963 bp 44.95 1.00 81.91
RBG_13_OP3_44_8_RBG_13_scaffold_503 48 30132 bp 41.95 1.00 83.08
RBG_13_OP3_44_8_RBG_13_scaffold_16561 8 5508 bp 44.17 1.00 83.22
RBG_13_OP3_44_8_RBG_13_scaffold_4063 16 16557 bp 43.78 1.00 83.40
RBG_13_OP3_44_8_RBG_13_scaffold_3299 21 17745 bp 42.66 1.00 83.47
RBG_13_OP3_44_8_RBG_13_scaffold_11458 17 15728 bp 43.18 1.00 83.62
RBG_13_OP3_44_8_RBG_13_scaffold_2706 30 23270 bp 42.06 1.00 83.93
RBG_13_OP3_44_8_RBG_13_scaffold_6463 15 13753 bp 41.92 1.00 84.33
RBG_13_OP3_44_8_RBG_13_scaffold_16279 6 5516 bp 41.03 1.00 84.35
RBG_13_OP3_44_8_RBG_13_scaffold_2817 32 29736 bp 42.47 1.00 84.63
RBG_13_OP3_44_8_RBG_13_scaffold_1776 21 19753 bp 44.95 1.00 84.69
RBG_13_OP3_44_8_RBG_13_scaffold_2961 19 20845 bp 42.48 1.00 84.74
RBG_13_OP3_44_8_RBG_13_scaffold_6838 22 13168 bp 41.73 1.00 85.09
RBG_13_OP3_44_8_RBG_13_scaffold_13321 12 9944 bp 45.08 1.00 85.35
RBG_13_OP3_44_8_RBG_13_scaffold_9427 14 8675 bp 43.29 1.00 86.01
RBG_13_OP3_44_8_RBG_13_scaffold_14447 7 6879 bp 45.94 1.00 86.09
RBG_13_OP3_44_8_RBG_13_scaffold_24629 6 4951 bp 39.91 1.00 86.47
RBG_13_OP3_44_8_RBG_13_scaffold_15521 22 19668 bp 43.06 1.00 86.91
RBG_13_OP3_44_8_RBG_13_scaffold_9456 11 11778 bp 41.53 1.00 87.19
RBG_13_OP3_44_8_RBG_13_scaffold_2189 18 19132 bp 43.31 1.00 87.43
RBG_13_OP3_44_8_RBG_13_scaffold_2476 18 13724 bp 43.71 1.00 87.74
RBG_13_OP3_44_8_RBG_13_scaffold_3188 14 13706 bp 44.49 1.00 87.82
RBG_13_OP3_44_8_RBG_13_scaffold_8364 7 7063 bp 40.07 1.00 88.31
RBG_13_OP3_44_8_RBG_13_scaffold_9469 7 6712 bp 44.17 1.00 89.48
RBG_13_OP3_44_8_RBG_13_scaffold_6022 11 13365 bp 42.50 1.00 89.49
RBG_13_OP3_44_8_RBG_13_scaffold_11564 9 6511 bp 40.29 1.00 89.57
RBG_13_OP3_44_8_RBG_13_scaffold_4127 12 10737 bp 42.76 1.00 89.63
RBG_13_OP3_44_8_RBG_13_scaffold_5725 9 9201 bp 44.63 1.00 89.79
RBG_13_OP3_44_8_RBG_13_scaffold_5908 12 8977 bp 44.65 1.00 90.13
RBG_13_OP3_44_8_RBG_13_scaffold_11620 11 6852 bp 39.13 1.00 91.07
RBG_13_OP3_44_8_RBG_13_scaffold_9320 8 7262 bp 46.30 1.00 91.34
Displaying items 51-100 of 113 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.