ggKbase home page

2500-CURATED-GENOMES Organisms Analysis

Owner: Karthik Anantharaman

Search / Filter Organisms



Displaying items 1-30 of 2539 in total
Name Taxonomy Completeness Size % GC Cov ⬆ # Ctg # Genes Max ctg.
Candidatus Edwardsbacteria bacterium GWE2_54_12
GWE2_RIFOXYC12_FULL_TA06_54_24_curated_54_0

curated

RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria
near complete RP 53 / 55 MC: 1 BSCG 48 / 51 ASCG 13 / 38 2.76 Mbp 54.17 % 0.00 8 2436 958220
Deltaproteobacteria bacterium RBG_16_42_7
RBG_16_RBG_16_Deltaproteobacteria_42_7_curated_40_1

curated, ggDB

RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria
partial RP 31 / 55 MC: 1 BSCG 30 / 51 MC: 1 ASCG 4 / 38 MC: 1 1.06 Mbp 40.06 % 1.00 145 1257 18228
Desulfobacca sp. RBG_16_58_9
RBG_16_RBG_16_Desulfobacca_58_9_curated_57_1

curated, ggDB

RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria
partial RP 28 / 55 BSCG 27 / 51 ASCG 5 / 38 1.43 Mbp 56.93 % 1.00 186 1670 20630
Burkholderiales bacterium GWF1_66_17
GWF1_GWE1_Burkholderiales_65_30_curated_66_1

curated

GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38 5.12 Mbp 65.71 % 1.00 28 4904 821643
Planctomycetes bacterium RIFOXYB12_FULL_42_10
RifOxyB12_full_RifOxyB12_full_Planctomycetes_42_10_curated_38_1

curated, ggDB

RifOxyB12_full_Planctomycetes_42_10_curated, Planctomycetes, Bacteria
partial RP 20 / 55 BSCG 21 / 51 ASCG 4 / 38 2.21 Mbp 37.95 % 1.00 1238 1956 7985
Tenericutes bacterium RIFOXYA12_FULL_35_10
RifOxyA12_full_RIFOXYB2_FULL_Tenericutes_36_25_curated_35_1

curated

RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria
near complete RP 50 / 55 BSCG 51 / 51 MC: 1 ASCG 14 / 38 2.05 Mbp 34.65 % 1.00 106 1998 88486
Deltaproteobacteria bacterium GWC2_55_46
GWC2_GWC2_Deltaproteobacteria_55_46b_curated_55_1

curated

GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria
near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 2.79 Mbp 55.39 % 1.00 3 2660 2590723
Deltaproteobacteria bacterium RBG_13_51_10
RBG_13_RBG_13_Deltaproteobacteria_51_10_curated_46_1

curated, ggDB

RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria
partial RP 26 / 55 BSCG 29 / 51 ASCG 6 / 38 1.43 Mbp 46.01 % 1.00 205 1805 17821
Ignavibacteria bacterium RIFOXYA12_FULL_35_25
RifOxyA12_full_RIFOXYD12_FULL_Ignavibacteria_36_8_curated_35_1

curated

RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria
near complete RP 53 / 55 MC: 2 BSCG 51 / 51 ASCG 12 / 38 4.18 Mbp 35.25 % 1.00 128 3631 160532
candidate division WWE3 bacterium RIFOXYC1_FULL_40_10
RIFOXYC1_FULL_RIFOXYA2_FULL_WWE3_46_9_curated_40_1

Complete Genome

curated

WWE3
near complete RP 46 / 55 MC: 1 BSCG 48 / 51 ASCG 11 / 38 897.16 Kbp 40.36 % 1.00 1 948 897158
Candidatus Azambacteria bacterium RIFOXYD1_FULL_42_38
RIFOXYD1_FULL_Azambacteria_42_1

Complete Genome Azambacteria-ii

curated

Parcubacteria
near complete RP 45 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 11 / 38 585.02 Kbp 42.32 % 1.00 1 620 585024
candidate division WWE3 bacterium RIFOXYA1_FULL_40_11
RIFOXYA1_FULL_RIFOXYA2_FULL_WWE3_46_9_curated_40_1

Complete Genome

curated

WWE3
near complete RP 46 / 55 MC: 1 BSCG 48 / 51 ASCG 11 / 38 897.16 Kbp 40.36 % 1.00 1 948 897158
Syntrophobacterales bacterium RIFOXYC2_FULL_60_23
RIFOXYC2_FULL_RIFOXYC2_FULL_Syntrophobacterales_60_23_curated_50_1

curated, ggDB

RIFOXYC2_FULL_Syntrophobacterales_60_23_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria
partial RP 17 / 55 MC: 1 BSCG 13 / 51 ASCG 2 / 38 1.59 Mbp 50.25 % 1.00 824 1492 9176
Chloroflexi bacterium RIFOXYD12_FULL_57_15
RIFOXYD12_FULL_RIFOXYD12_FULL_Chloroflexi_57_15_curated_52_1

curated, ggDB

RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria
near complete RP 48 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 7 / 38 2.85 Mbp 51.71 % 1.00 1001 4238 17466
candidate division WWE3 bacterium RBG_13_37_7
RBG_13_RBG_13_WWE3_37_7_curated_33_1

curated, ggDB

RBG_13_WWE3_37_7_curated, WWE3, Bacteria
partial RP 29 / 55 BSCG 30 / 51 ASCG 2 / 38 327.91 Kbp 33.50 % 1.00 34 397 22251
candidate division WOR-1 bacterium RIFOXYA2_FULL_52_19
RIFOXYA2_FULL_RIFOXYA2_FULL_WOR_1_51_19_curated_52_1

Complete Genome Misnamed in candidate division WOR-1 bacterium RIFOXYA2_FULL_51_19

curated, ggDB

WOR1
near complete RP 47 / 55 MC: 1 BSCG 49 / 51 ASCG 10 / 38 MC: 2 1.67 Mbp 51.81 % 1.00 1 1563 1668697
Chloroflexi bacterium RIFOXYC12_FULL_59_14
RifOxyC12_full_RIFOXYC12_FULL_Chloroflexi_59_14_curated_53_1

curated, ggDB

RIFOXYC12_FULL_Chloroflexi_59_14_curated, Chloroflexi, Bacteria
partial RP 34 / 55 BSCG 29 / 51 MC: 1 ASCG 4 / 38 1.47 Mbp 53.37 % 1.00 633 1450 13956
Chloroflexi bacterium RBG_13_60_9
RBG_13_RBG_13_Chloroflexi_60_9_curated_53_1

curated, ggDB

RBG_13_Chloroflexi_60_9_curated, Chloroflexi, Bacteria
partial RP 31 / 55 MC: 1 BSCG 30 / 51 ASCG 6 / 38 1.65 Mbp 53.40 % 1.00 215 2150 31786
candidate division WOR-1 bacterium RIFOXYA12_FULL_52_29
RifOxyA12_full_RIFOXYA2_FULL_WOR_1_51_19_curated_52_1

Complete Genome

curated

WOR1
near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 11 / 38 MC: 2 1.67 Mbp 51.81 % 1.00 1 1563 1668697
Planctomycetes bacterium RIFOXYD12_FULL_42_12
RIFOXYD12_FULL_RIFOXYD12_FULL_Planctomycetes_42_12_curated_36_1

curated, ggDB

RIFOXYD12_FULL_Planctomycetes_42_12_curated, Planctomycetes, Bacteria
partial RP 38 / 55 MC: 2 BSCG 34 / 51 MC: 1 ASCG 6 / 38 2.02 Mbp 36.07 % 1.00 1018 2493 11972
Deltaproteobacteria bacterium RIFOXYB2_FULL_66_7
RIFOXYB2_FULL_RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated_61_1

curated, ggDB

RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria
partial RP 38 / 55 MC: 2 BSCG 36 / 51 MC: 2 ASCG 7 / 38 MC: 1 2.08 Mbp 60.63 % 1.00 944 3174 13138
Omnitrophica WOR_2 bacterium RBG_13_44_8
RBG_13_RBG_13_WOR_2_44_8_curated_39_1

curated, ggDB

RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria
partial RP 25 / 55 MC: 2 BSCG 26 / 51 ASCG 3 / 38 827.68 Kbp 38.51 % 1.00 99 1132 22056
Candidatus Shapirobacteria bacterium RBG_13_44_7
RBG_13_RBG_13_OP11_Shapirobacteria_44_7_curated_41_1

curated, ggDB

RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria
partial RP 27 / 55 MC: 1 BSCG 28 / 51 MC: 1 ASCG 7 / 38 412.52 Kbp 41.48 % 1.00 33 489 37832
Caulobacterales bacterium RIFOXYA1_FULL_67_7
RIFOXYA1_FULL_RIFOXYA1_FULL_Brevundimonas_67_7_curated_60_1

curated, ggDB

RIFOXYA1_FULL_Brevundimonas_67_7_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
near complete RP 48 / 55 BSCG 46 / 51 MC: 3 ASCG 5 / 38 1.99 Mbp 60.24 % 1.00 910 3122 9941
candidate division WWE3 bacterium RIFOXYB1_FULL_40_22
RIFOXYB1_FULL_RIFOXYA2_FULL_WWE3_46_9_curated_40_1

Complete Genome

curated

WWE3
near complete RP 46 / 55 MC: 1 BSCG 48 / 51 ASCG 11 / 38 897.16 Kbp 40.36 % 1.00 1 948 897158
Omnitrophica WOR_2 bacterium RBG_13_44_8b
RBG_13_unknown_42_1

curated, ggDB

partial RP 42 / 55 MC: 1 BSCG 40 / 51 ASCG 7 / 38 MC: 1 1.38 Mbp 41.93 % 1.00 113 1501 48892
Candidatus Fluviicola riflensis RIFCSPHIGHO2_02_FULL_43_260
RIFCSPHIGHO2_02_FULL_RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated_43_1

COMPLETE closed genome

curated

R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria
complete (manually assigned) RP 53 / 55 MC: 4 BSCG 51 / 51 ASCG 12 / 38 4.55 Mbp 42.82 % 1.00 1 3948 4551443
Candidatus Roizmanbacteria bacterium RIFOXYC1_FULL_38_14
RIFOXYC1_FULL_RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated_37_1

Complete Genome

curated

Microgenomates
near complete RP 46 / 55 BSCG 44 / 51 ASCG 8 / 38 1.22 Mbp 37.33 % 1.00 1 1201 1216967
candidate division Kazan bacterium RIFCSPHIGHO2_01_FULL_46_14
RIFCSPHIGHO2_01_FULL_RIFCSPLOWO2_01_FULL_KAZAN_45_19_curated_46_1

Complete Genome, misnamed in NCBI as candidate division Kazan bacterium RIFCSPHIGHO2_01_FULL_44_14

curated

R_KAZAN_45_19, Kazan, Bacteria
near complete RP 51 / 55 MC: 2 BSCG 48 / 51 ASCG 10 / 38 699.98 Kbp 45.58 % 1.00 1 677 699981
Candidatus Roizmanbacteria bacterium RIFOXYA1_FULL_37_12
RIFOXYA1_FULL_RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated_37_1

Complete Genome

curated

Microgenomates
near complete RP 46 / 55 BSCG 44 / 51 ASCG 8 / 38 1.22 Mbp 37.33 % 1.00 1 1201 1216931
Displaying items 1-30 of 2539 in total