ggKbase home page

rifoxyc2_full_scaffold_5299_curated_7

Organism: Syntrophobacterales bacterium RIFOXYC2_FULL_60_23

partial RP 17 / 55 MC: 1 BSCG 13 / 51 ASCG 2 / 38
Location: comp(2974..4122)

Top 3 Functional Annotations

Value Algorithm Source
Lytic transglycosylase catalytic; K08307 membrane-bound lytic murein transglycosylase D [EC:3.2.1.-] similarity KEGG
DB: KEGG
  • Identity: 51.9
  • Coverage: 397.0
  • Bit_score: 360
  • Evalue 5.80e-97
  • rbh
Lytic transglycosylase catalytic n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NHQ9_DESAR similarity UNIREF
DB: UNIREF100
  • Identity: 51.9
  • Coverage: 397.0
  • Bit_score: 360
  • Evalue 1.90e-96
  • rbh
Tax=RIFOXYC2_FULL_Syntrophobacterales_60_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 383.0
  • Bit_score: 725
  • Evalue 5.20e-206

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYC2_FULL_Syntrophobacterales_60_23_curated → Syntrophobacterales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1149
ATGATCAAGAAAGTCTTCCAGGAGGCCGGTCTGCCGGAGGATTTGGCCTACCTGGCCATGATCGAGAGCGGCTTCAATAACCGGGCCTATTCCCCGGCCGCGGCCTGCGGCATGTGGCAGTTCATCAAAGGCACCGGTCTGCGCTACGGGCTGGCCATCAACAGCTACGTGGATGAGCGGCGGGACCCGGAAAAGGCCACCCGGGCGGCAGCCAACTACCTGTTGGACCTCTATAAGCAGTTCGGTTCCTGGTATCTGGCGGCGGCCTCCTATAACTGCGGCGAGGGCCGGGTGCAGCGGGAGCTGAACCAGAGCAGCCACAAGAACTTCTGGGAACTCTCGGCCAACATGTGCCTGCCCACCGAAACCAAGAACTACGTGCCCCAAATGATTGCAGCTACCATCATCGCCAAAAACCCGGAAAAATTCGGGTTCAAAAACGTGCCCTATTTGCCGCCGGTCAGATACGACCAGGTGCCGGTAACGGAGACCACCTCGCTGACTGCGGCGGCGGTGGCGGTGAACGTTCCCCCTGATGAGGTGCAAGATCTCAACCCGGAATTGCTGCGGGGTATCACTCCCCCGGATGCGCCGTCGTATACGCTGAATCTGCCTCCCAGCAGCAAAGAAAAGTTCTTGAAAAACATTACCCTGGCCCGCATCGAACATCCGGCGGTGGCCTCCCATCCGATCCGGACGGCCAGAAGCTCCGGGCCGTCCTATTCCAGCGGCCGGAGCTCTTCTAACCAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnGCAAGAGCCGGAGCTCTGCCAAGGCCTCCACCAAGGCCGCCAGCCGGACCTACGCCAAACAGGAGAAACCTGCCAAAAGCACCCCGGTTAAGGCCGGGGCCGCCCCCGTGGTTCAGGCTTCTCTGTTCGGGACCCCGTCCCTGGCCACCAAATCCAGCGACAGCAAAAAAAACAAGACGGCCCTCATAGGTACCTCCAAGACCCAGGCTAAAAACCAGAAACCAGCCGAACCCCGGTTGGCGAAAAAGAACGACACCGCCTCCAAGAGCGCCGCCAAACCCAAGAAAGCCGGTTCATCCACCAGCCGCGCCAAGGACAAGTATTCCAAGTCCAAGTCCAAGCGGGCCATCATGGTTTCCGAAGCCCGGTAA
PROTEIN sequence
Length: 383
MIKKVFQEAGLPEDLAYLAMIESGFNNRAYSPAAACGMWQFIKGTGLRYGLAINSYVDERRDPEKATRAAANYLLDLYKQFGSWYLAAASYNCGEGRVQRELNQSSHKNFWELSANMCLPTETKNYVPQMIAATIIAKNPEKFGFKNVPYLPPVRYDQVPVTETTSLTAAAVAVNVPPDEVQDLNPELLRGITPPDAPSYTLNLPPSSKEKFLKNITLARIEHPAVASHPIRTARSSGPSYSSGRSSSNXXXXXXXXXXXKSRSSAKASTKAASRTYAKQEKPAKSTPVKAGAAPVVQASLFGTPSLATKSSDSKKNKTALIGTSKTQAKNQKPAEPRLAKKNDTASKSAAKPKKAGSSTSRAKDKYSKSKSKRAIMVSEAR*