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rifoxyd3_full_scaffold_2051_curated_3

Organism: Planctomycetes bacterium RIFOXYD12_FULL_42_12

partial RP 38 / 55 MC: 2 BSCG 34 / 51 MC: 1 ASCG 6 / 38
Location: 1196..2005

Top 3 Functional Annotations

Value Algorithm Source
sigma-70 family RNA polymerase sigma factor id=3249193 bin=GWC2_Planctomycete_KSU_39_26 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes similarity UNIREF
DB: UNIREF100
  • Identity: 74.1
  • Coverage: 270.0
  • Bit_score: 409
  • Evalue 3.20e-111
  • rbh
RNA polymerase, sigma 38 subunit, RpoS; K03086 RNA polymerase primary sigma factor similarity KEGG
DB: KEGG
  • Identity: 40.9
  • Coverage: 259.0
  • Bit_score: 210
  • Evalue 9.00e-52
Tax=RIFOXYD2_FULL_Planctomycetes_41_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 270.0
  • Bit_score: 535
  • Evalue 3.20e-149

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Taxonomy

RIFOXYD2_FULL_Planctomycetes_41_16_curated → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 810
ATGGAATTCGCCTTTCAAGTTTACATTAAAGACTTAAAAAAAATTTCTCCTCTCACGGTTGAAGAAGAAAAAAGATTATTTAAAAAACTTTCACAGGGTGATTCTGAGGCAAAAAAATCTATTGTGATAGCTCATCTTCCTCTGGTTATAAAGATTGCCCGCCGGTTTGCTTATTATGGTGCATCTCTGCTTGATCTGATCAGTGAAGGAAATATTGGACTTATGCGTGCAGCTGAAAAGTTTGACTACAGGATAGGTCAACGGTTCGGCAAGTATGCTTCATGGTGGATTAAATGGACTATCATTCGGGCGTTGATTAACAATTCAAAGACCATACACATTCCCGTCTACATGGCAGAAAAAATTTATAAGTGGAAGAAAATATCTTCAAAACTAGCAAACACCTTACAGAGACTGCCAGATCGAAATGAAATTGCGGAAGAATTGAATGTCGGCGAAAAACAGTCCCGTTGGATAGAAAGAGCCGTAAGAAACACATATACTCTCAATTATGCGCACTTCCAGAAAGATGATTCAATGGAATTTAGTGAATCTATACCAGACGAACGGGTGAAAATGCCTGAAGACGAATTGATCGAATCTTATGATAAAAAAGAGTTAAGAAGGGTACTGGATATAATCGATCATAGAGATTCACACGTGCTAAAAATGCGATATGGATTAGATGGTATAGAACCCATGACACTCCGAGAGGTAAGTGAAAAACTTAATATCAGCCGAGAGTGGGTGAGAAAGATTGAAAAAAAAGCTTTATCTAAACTCAACCAACTTATGGCTTGTAACAGATAA
PROTEIN sequence
Length: 270
MEFAFQVYIKDLKKISPLTVEEEKRLFKKLSQGDSEAKKSIVIAHLPLVIKIARRFAYYGASLLDLISEGNIGLMRAAEKFDYRIGQRFGKYASWWIKWTIIRALINNSKTIHIPVYMAEKIYKWKKISSKLANTLQRLPDRNEIAEELNVGEKQSRWIERAVRNTYTLNYAHFQKDDSMEFSESIPDERVKMPEDELIESYDKKELRRVLDIIDHRDSHVLKMRYGLDGIEPMTLREVSEKLNISREWVRKIEKKALSKLNQLMACNR*