ggKbase home page

31_018_UNK

In projects: 31_018
Displaying items 1-50 of 104 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
31_018_scaffold_425 2 1048 bp 43.70 3.05 36.36
31_018_scaffold_393
Species: Escherichia coli (100%)
1 1120 bp 52.59 3.21 99.64
31_018_scaffold_290
Species: Thermoanaerobacter siderophilus (50%)
2 1654 bp 31.20 3.63 77.81
31_018_scaffold_416
Species: Brevibacillus panacihumi (100%)
2 1070 bp 46.36 3.64 91.12
31_018_scaffold_293
Class: Bacilli (50%)
4 1644 bp 52.74 3.65 82.48
31_018_scaffold_334
Species: Bacillus cereus (66.67%)
3 1373 bp 29.64 4.08 99.64
31_018_scaffold_426
Species: Lysinibacillus fusiformis (66.67%)
3 1048 bp 46.56 4.20 77.00
31_018_scaffold_326
Species: Clostridium sp. IBUN22A (50%)
2 1399 bp 32.24 4.36 100.57
31_018_scaffold_453
Species: Staphylococcus sp. DORA_6_22 (100%)
1 1001 bp 32.97 4.40 99.80
31_018_scaffold_413
Species: Lactococcus lactis (50%)
2 1073 bp 30.57 4.66 85.00
31_018_scaffold_266 3 2158 bp 51.90 4.82 83.97
31_018_scaffold_380
Species: Lactococcus lactis (50%)
2 1163 bp 32.93 4.82 75.06
31_018_scaffold_386
Species: Lactococcus lactis (100%)
1 1145 bp 34.24 5.07 99.83
31_018_scaffold_444
Species: Lactococcus lactis (100%)
1 1019 bp 45.73 5.10 85.38
31_018_scaffold_272
Species: Klebsiella pneumoniae (100%)
1 2001 bp 57.67 5.20 74.21
31_018_scaffold_317
Species: Lactococcus lactis (100%)
1 1423 bp 34.79 5.34 99.93
31_018_scaffold_412
Species: Lactococcus lactis (50%)
2 1077 bp 33.52 5.85 97.21
31_018_scaffold_429
Species: Lactococcus lactis (100%)
1 1046 bp 29.54 6.02 76.58
31_018_scaffold_366
Species: Lactococcus lactis (100%)
1 1221 bp 45.70 6.06 99.26
31_018_scaffold_292
Species: Lactococcus lactis (100%)
1 1646 bp 47.81 6.08 99.88
31_018_scaffold_341
Species: Lactococcus lactis (100%)
1 1342 bp 36.29 6.11 91.43
31_018_scaffold_362
Species: Lactococcus lactis (50%)
2 1224 bp 39.13 6.21 91.67
31_018_scaffold_371
Species: Lactococcus lactis (100%)
1 1190 bp 35.04 6.22 99.83
31_018_scaffold_384
Species: Lactococcus lactis (50%)
2 1151 bp 36.84 6.26 49.52
31_018_scaffold_258
Species: Homo sapiens (50%)
2 2448 bp 45.18 6.29 29.29
31_018_scaffold_345
Species: Lactococcus lactis (75%)
4 1334 bp 37.18 7.05 69.94
31_018_scaffold_343
Species: Escherichia coli (100%)
1 1342 bp 60.28 8.72 85.17
31_018_scaffold_431
Species: Homo sapiens (100%)
2 1044 bp 39.46 8.81 87.36
31_018_scaffold_262
Genus: Lactococcus (66.67%)
3 2358 bp 32.36 9.71 52.67
31_018_scaffold_336
Species: Eggerthella lenta (100%)
1 1351 bp 76.98 10.95 74.61
31_018_scaffold_274
Species: RIFOXYD1_FULL_OD1_Kaiserbacteria_47_14_curated (50%)
2 1967 bp 43.98 12.05 78.55
31_018_scaffold_234
Species: Lactococcus lactis (100%)
5 4293 bp 32.49 14.05 82.81
31_018_scaffold_255
Species: Lactococcus lactis (66.67%)
3 2558 bp 34.83 14.31 66.97
31_018_scaffold_273
Species: Paenibacillus riograndensis (50%)
2 1995 bp 44.56 14.99 63.76
31_018_scaffold_318
Species: Lactococcus lactis (100%)
2 1422 bp 38.40 15.33 63.92
31_018_scaffold_295
Species: Paenibacillus sp. oral taxon 786 (100%)
1 1635 bp 49.72 17.74 83.49
31_018_scaffold_267
Species: Paenibacillus macerans (50%)
2 2150 bp 53.63 18.23 60.42
31_018_scaffold_313
Species: Lactococcus lactis (100%)
1 1458 bp 38.41 18.93 90.54
31_018_scaffold_322
Order: Lactobacillales (100%)
3 1408 bp 36.29 24.72 89.49
31_018_scaffold_205
Species: Streptococcus agalactiae (90.91%)
11 9186 bp 29.28 24.89 74.79
31_018_scaffold_264
Species: Paenibacillus macerans (100%)
2 2236 bp 40.07 26.74 92.71
31_018_scaffold_335
Species: Eggerthella sp. HGA1 (100%)
1 1355 bp 74.17 28.27 77.71
31_018_scaffold_404
Species: Streptococcus agalactiae (100%)
1 1087 bp 42.59 28.79 99.91
31_018_scaffold_195
Species: Streptococcus agalactiae (106.67%)
17 12510 bp 30.32 29.02 71.65
31_018_scaffold_370
Species: Eggerthella lenta (100%)
1 1197 bp 66.42 29.49 95.99
31_018_scaffold_257
Species: Lactococcus lactis (50%)
4 2470 bp 38.26 32.87 95.83
31_018_scaffold_221
Species: Lactococcus lactis (100%)
3 5361 bp 35.91 33.28 97.03
31_018_scaffold_330 5 1384 bp 35.91 33.89 88.44
31_018_scaffold_285
Species: Lactococcus lactis (100%)
3 1760 bp 31.25 34.32 87.78
31_018_scaffold_308
Species: Eggerthella lenta (100%)
1 1499 bp 68.18 34.49 87.26
Displaying items 1-50 of 104 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.