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64_003_scaffold_125_24

Organism: 64_003_Staphylococcus_epidermidis_32_33

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38
Location: 20295..23795

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 999.99
  • Bit_score: 2288
  • Evalue 0.0
mfd; transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] similarity KEGG
DB: KEGG
  • Identity: 99.1
  • Coverage: 999.99
  • Bit_score: 2281
  • Evalue 0.0
Transcription-repair-coupling factor n=4 Tax=Staphylococcus epidermidis RepID=J0QWL9_STAEP similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 2294
  • Evalue 0.0

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Taxonomy

Staphylococcus epidermidis → Staphylococcus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3501
ATGATTGCAAATTACATTAGCGAAGATAAACGTTTTCAAGAATTAGATGAAGTCTTCGGCCAAGAGAATATTTTAGTTACGGGATTATCCCCGTCAGCGAAGGCAACAATTATTGCTGAAAAATATTTAAAAGATCATAAACAAATGCTACTCGTAACTAATAATTTATACCAAGCAGATAAAATCGAAACTGACATTTTACAATATGTAGATGACTCAGAAGTTTATAAATATCCTGTTCAAGATATAATGACTGAAGAGTTTTCTACTCAAAGTCCACAATTGATGAGTGAGCGTGTTAGAACGTTGACTGCGTTAGCCCAAGGCGAAAAAGGGTTATTTATTGTGCCTTTAAACGGATTTAAAAAATGGTTAACACCGGTTGATTTATGGAAAGATCATCAAATGACGATTAAAGTAGGCCAGGATATTGATGTTGATACGTTCTTAAATAAATTAGTTAATATGGGTTATCGTCGAGAAAGTGTAGTGTCACATATTGGTGAGTTTTCATTGCGTGGTGGAATTATAGATATATATCCATTGGTAGGAACACCTGTGAGAATAGAGCTATTTGATACTGAAGTAGATTCCATCAGAGACTTTGATGTAGAAACACAACGTTCTAACGATAATATAAATCAAGTTGAAATCACAACAGCCAGTGATTACATTATTACTGATGAAGTGATACAACACTTACAAAATGAACTTAAAAAAGCATATGAATATACACGCCCTAAAATTGAGAAGTCCGTACGTAATGATTTAAAAGAGACATATGAAAGTTTCAAGTTATTTGAATCTACCTTTTTTGATCATCAATTGTTACGACGTCTTGTTGCATTTATGTATGAAAAACCATCAACCCTTATTGATTATTTCCAAAAAAACGCGATTGTTGTAGTTGATGAGTTTAATCGTATTAAGGAAACAGAAGAAACACTCACTACAGAAGTTGAAGATTTTATGAGTAACTTAATTGAGAGTGGAAATGGATTTATCGGACAAGGATTTATGAAGTATGAAAGTTTTGACGCATTACTAGAGAAACATGCCGTTGCATATTTCACATTATTTACATCTTCGATGCAAGTGCCATTACAACATATTATTAAGTTCTCTTGTAAACCAGTTCAACAATTTTATGGTCAATATGACATTATGCGCTCGGAATTTCAAAGATACGTGCATCAAGATTACACTGTCGTAGTTCTTGTTGAAACTGAAACAAAAGTTGAACGTATTCAATCAATGCTTAACGAAATGCATATTCCAACAGTATCAAATATTCATGAAGATATTGATGGTGGTCAAGTTGTAGTAACGGAAGGTAGTCTTTCTGAAGGCTTTGAATTACCTTATATGCAGTTGGTAGTCATCACAGAAAGAGAATTATTTAAAACGAGACAAAAGAAACAACGTAAACGTACAAAAACGATTTCTAATGCTGAAAAAATAAAATCATATCAAGACTTAAATGTGGGCGATTATATTGTGCATGTGCATCATGGTGTCGGACGATACTTAGGTGTTGAAACACTAGAAGTTGGAGATACACATCGCGACTATATTAAATTGCAATATAAAGGAACCGATCAATTATTTGTTCCAGTTGATCAAATGGATCAAGTTCAAAAGTATGTGGCTTCTGAAGATAAGTCGCCTAGATTAAATAAATTAGGCGGGACAGAATGGAAAAAAACAAAGGCCAAAGTTCAACAAAGTGTTGAAGATATAGCTGATGAATTAATTGATTTGTATAAAGAACGTGAAATGTCTGTAGGTTACCAATACGGCCAAGATACTGCAGAGCAATCAGCATTTGAGCATGATTTTCCATATGAATTAACACCCGATCAAAGTAAATCAATCGATGAAATTAAAGGTGACATGGAAAAAGCAAGACCTATGGACCGCCTTCTTTGTGGTGATGTGGGATATGGTAAAACTGAAGTGGCTGTCCGTGCAGCGTTTAAAGCTGTCATGGATGGTAAGCAAGTTGCGTTTTTAGTACCAACAACGATTCTTGCACAACAACACTACGAAACACTCCTTGAACGTATGCAAGATTTTCCGGTCGAAATTCAATTGGTAAGTCGATTCCGCACAGCTAAAGAAATAAGGGAAACTAAAGAAGGGCTCGAATCAGGATATGTTGACATTGTCGTAGGTACACATAAATTATTAGGTAAAGATATTCAATATAAAGATTTAGGATTGCTTATTGTTGATGAAGAACAACGTTTTGGAGTACGACATAAAGAACGCATTAAAACTTTGAAAAAAAACGTTGATGTACTGACGCTTACTGCAACACCAATACCAAGAACATTGCATATGAGTATGTTAGGTGTACGTGACTTATCAGTGATTGAAACACCACCTGAAAATCGTTTTCCTGTACAAACTTATGTCTTAGAGCAGAATACGAACTTTATTAAAGAGGCATTAGAGCGTGAATTATCTCGCGATGGACAAGTATTTTATTTGTATAACAAAGTGCAGTCCATTTATGAAAAAAGAGAACAACTTCAAATGTTAATGCCTGACGCTAACATTGCTGTAGCACATGGCCAAATGACTGAACGCGATTTAGAGGAAACGATGTTAAGCTTTATTAATCATGAGTACGATATTTTAGTAACGACAACAATTATTGAAACAGGTGTAGACGTACCAAATGCTAATACGTTAATCATAGAAGAGGCCGATCGTTTTGGATTAAGCCAGCTATACCAATTAAGAGGGCGTGTAGGACGTTCAAGTAGAATCGGTTATGCTTATTTCTTACATCCAGCTAACAAAGTGTTAAATGAGACTGCTGAAGAGCGATTGCAAGCTATTAAGGAGTTTACCGAACTAGGTTCAGGTTTTAAAATCGCTATGCGAGATTTAAATATTCGTGGAGCAGGTAATTTACTCGGTAAGCAACAACATGGCTTTATTGATTCGGTTGGTTTCGATTTATACTCTCAAATGTTAGAAGAAGCTGTAAACGAAAAACGTGGAATTAAAGAAGAATCGCCGGATGCACCAGATATTGAAGTTGAATTGCATTTAGATGCTTATTTACCAGCTGAATATATACAAAGTGAACAGGCTAAAATTGAGATATACAAAAAACTTCGAAAAGTAGAAACAGAAGAACAACTTTTCGATGTCAAAGATGAATTAATAGATCGTTTTAATGATTATCCAATTGAAGTCGAACGATTATTAGATATTGTTGAAATCAAAGTCCACGCTCTACATGCGGGTGTCGAATTGATAAAAGACAAAGGAAAATCTATACAAATCATTTTATCACCTAAAGCGACTGAAGATATTAATGGAGAAGAATTGTTTAAACAGACGCAACCTCTTGGTAGAGCAATGAAAGTTGGCGTGCAAAATAATGCAATGAATGTAACGCTAACAAAATCAAAACAATGGTTAGATAGTTTGAAATTCTTAGTTAGATGTATTGAAGAAAGTATGGCGATTAAAGATGAAGACTAA
PROTEIN sequence
Length: 1167
MIANYISEDKRFQELDEVFGQENILVTGLSPSAKATIIAEKYLKDHKQMLLVTNNLYQADKIETDILQYVDDSEVYKYPVQDIMTEEFSTQSPQLMSERVRTLTALAQGEKGLFIVPLNGFKKWLTPVDLWKDHQMTIKVGQDIDVDTFLNKLVNMGYRRESVVSHIGEFSLRGGIIDIYPLVGTPVRIELFDTEVDSIRDFDVETQRSNDNINQVEITTASDYIITDEVIQHLQNELKKAYEYTRPKIEKSVRNDLKETYESFKLFESTFFDHQLLRRLVAFMYEKPSTLIDYFQKNAIVVVDEFNRIKETEETLTTEVEDFMSNLIESGNGFIGQGFMKYESFDALLEKHAVAYFTLFTSSMQVPLQHIIKFSCKPVQQFYGQYDIMRSEFQRYVHQDYTVVVLVETETKVERIQSMLNEMHIPTVSNIHEDIDGGQVVVTEGSLSEGFELPYMQLVVITERELFKTRQKKQRKRTKTISNAEKIKSYQDLNVGDYIVHVHHGVGRYLGVETLEVGDTHRDYIKLQYKGTDQLFVPVDQMDQVQKYVASEDKSPRLNKLGGTEWKKTKAKVQQSVEDIADELIDLYKEREMSVGYQYGQDTAEQSAFEHDFPYELTPDQSKSIDEIKGDMEKARPMDRLLCGDVGYGKTEVAVRAAFKAVMDGKQVAFLVPTTILAQQHYETLLERMQDFPVEIQLVSRFRTAKEIRETKEGLESGYVDIVVGTHKLLGKDIQYKDLGLLIVDEEQRFGVRHKERIKTLKKNVDVLTLTATPIPRTLHMSMLGVRDLSVIETPPENRFPVQTYVLEQNTNFIKEALERELSRDGQVFYLYNKVQSIYEKREQLQMLMPDANIAVAHGQMTERDLEETMLSFINHEYDILVTTTIIETGVDVPNANTLIIEEADRFGLSQLYQLRGRVGRSSRIGYAYFLHPANKVLNETAEERLQAIKEFTELGSGFKIAMRDLNIRGAGNLLGKQQHGFIDSVGFDLYSQMLEEAVNEKRGIKEESPDAPDIEVELHLDAYLPAEYIQSEQAKIEIYKKLRKVETEEQLFDVKDELIDRFNDYPIEVERLLDIVEIKVHALHAGVELIKDKGKSIQIILSPKATEDINGEELFKQTQPLGRAMKVGVQNNAMNVTLTKSKQWLDSLKFLVRCIEESMAIKDED*