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64_008_scaffold_294

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Displaying items 31-39 of 39 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_008_scaffold_294_31
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14981..15928
DNA (948bp) protein (316aa)
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
DNA-directed RNA polymerase subunit alpha n=192 Tax=Clostridium difficile RepID=RPOA_CLOD6 rbh
64_008_scaffold_294_32
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15949..16290
DNA (342bp) protein (114aa)
50S ribosomal protein L17 n=201 Tax=Clostridium difficile RepID=RL17_CLOD6
rplQ; 50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
64_008_scaffold_294_33
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16410..17243
DNA (834bp) protein (278aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
Energy-coupling factor transporter ATP-binding protein EcfA1 n=173 Tax=Clostridium difficile RepID=ECFA1_CLOD6 rbh
cobalt transporter ATP-binding subunit
64_008_scaffold_294_34
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17231..18097
DNA (867bp) protein (289aa)
cbiO2; ABC-type transport system, cobalt-specificATP-binding protein (EC:3.6.3.-)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Energy-coupling factor transporter ATP-binding protein EcfA2 n=168 Tax=Clostridium difficile RepID=ECFA2_CLOD6 rbh
64_008_scaffold_294_35
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18091..18894
DNA (804bp) protein (268aa)
Energy-coupling factor transporter transmembrane protein EcfT n=5 Tax=Clostridium difficile RepID=Q18CJ3_CLOD6
cbiQ; ABC-type transport system, cobalt-specificpermease
ABC-type transport system, cobalt-specific permease {ECO:0000313|EMBL:CAJ66921.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
64_008_scaffold_294_36
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18926..19657
DNA (732bp) protein (244aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
tRNA pseudouridine synthase A n=152 Tax=Clostridium difficile RepID=C9XIM4_CLODC
tRNA pseudouridine synthase ACD
64_008_scaffold_294_37
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19777..20208
DNA (432bp) protein (144aa)
50S ribosomal protein L13 n=188 Tax=Clostridium difficile RepID=RL13_CLOD6
rplM; 50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=1215059 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T5.;"
64_008_scaffold_294_38
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20237..20629
DNA (393bp) protein (131aa)
30S ribosomal protein S9 n=194 Tax=Clostridium difficile RepID=RS9_CLOD6
rpsI; 30S ribosomal protein S9
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=1215059 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T5.;"
64_008_scaffold_294_39
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21087..21884
DNA (798bp) protein (266aa)
N-acetylmuramoyl-L-alanine amidase CwlD {ECO:0000313|EMBL:EQG79044.1}; EC=3.5.1.28 {ECO:0000313|EMBL:EQG79044.1};; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
Germination-specific N-acetylmuramoyl-L-alanine amidase n=109 Tax=Clostridium difficile RepID=C9XIM7_CLODC
cwlD; germination-specific N-acetylmuramoyl-L-alanine amidase
Displaying items 31-39 of 39 in total

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