ggKbase home page

64_010_scaffold_339_21

Organism: 64_010_Citrobacter_freundii_52_40

partial RP 23 / 55 MC: 4 BSCG 24 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(17153..17965)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 270.0
  • Bit_score: 554
  • Evalue 8.70e-155
truA; tRNA pseudouridine synthase A (EC:4.2.1.70); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] similarity KEGG
DB: KEGG
  • Identity: 95.6
  • Coverage: 270.0
  • Bit_score: 530
  • Evalue 3.00e-148
tRNA pseudouridine synthase A n=6 Tax=Citrobacter RepID=J1FYW6_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 270.0
  • Bit_score: 554
  • Evalue 6.20e-155

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 813
ATGTCTGACCAGCAACAGCCGTCAACCCATAAAATTGCGCTGGGCATTGAGTATGACGGCAGCAAATATTATGGCTGGCAGCGCCAGAACGAAGTGCGTAGCGTTCAGGAAAAACTGGAAAAAGCGCTTTCTCAGGTGGCGAACGAACGCATTAATGTTTTTTGTGCAGGTCGCACGGATGCGGGCGTTCATGGCACTGGGCAGGTCGTGCATTTTGAAACCACTGCCCAGCGTAAAGATGCGGCCTGGACACTGGGGGTAAATGCGAATTTACCTGGTGACATCGCCGTGCGCTGGGTGAAAGCTGTACCTGATGATTTTCATGCCAGATTTAGCGCTACGGCTCGCCGTTATCGCTACATCATCTACAATCATCGGTTGCGCCCTGCGGTTTTGGGTAAAGGGGTAACCCATTATTATGAACCGCTGGACGCTGAGCGTATGCATCGTGCAGCCCAGTGTCTGATTGGCGAAAATGATTTTACCTCGTTCCGTGCGGTACAGTGCCAGTCGCGCACACCGTGGCGTAACGTGATGCACATTAACGTTGAACGTTTCGGTGCATATGTGGTGGTGGATATTAAAGCGAATGCCTTTGTACATCATATGGTCAGGAATATTGTCGGCAGCCTGATGGAAGTTGGCGCCAACAACCAGCCGGAGAGCTGGATAGCAGAACTGTTAGCGGCAAAGGACAGAACGCTGGCAGCGGCAACGGCGAAAGCGGAAGGACTGTATCTGGTTGCAGTAGATTACCCGGATCGGTTCGACCTGCCAAAACCGCCTATGGGCCCGCTATTTCTGGCGGACTAA
PROTEIN sequence
Length: 271
MSDQQQPSTHKIALGIEYDGSKYYGWQRQNEVRSVQEKLEKALSQVANERINVFCAGRTDAGVHGTGQVVHFETTAQRKDAAWTLGVNANLPGDIAVRWVKAVPDDFHARFSATARRYRYIIYNHRLRPAVLGKGVTHYYEPLDAERMHRAAQCLIGENDFTSFRAVQCQSRTPWRNVMHINVERFGAYVVVDIKANAFVHHMVRNIVGSLMEVGANNQPESWIAELLAAKDRTLAAATAKAEGLYLVAVDYPDRFDLPKPPMGPLFLAD*