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64_010_scaffold_422_8

Organism: 64_010_Atopobium_48_11

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: comp(10638..11579)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 313.0
  • Bit_score: 589
  • Evalue 3.70e-165
tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] similarity KEGG
DB: KEGG
  • Identity: 90.1
  • Coverage: 313.0
  • Bit_score: 555
  • Evalue 1.00e-155
tRNA pseudouridine synthase B n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W716_ATOPD similarity UNIREF
DB: UNIREF100
  • Identity: 90.1
  • Coverage: 313.0
  • Bit_score: 555
  • Evalue 3.20e-155

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Taxonomy

Atopobium sp. ICM42b → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 942
GTGAAGCGAGGAGCTAGTGGAATTAACGCACTTATTGCTGTTGACAAACCGCTTGGGCTGACCAGCCATGACGTGGTTTCTCGTGTTCGCCGTGCATTTGGCGAGAAACGCGTGGGGCATGCAGGCACTTTGGATCCTAATGCAAGTGGCGTGTTGGTAGTGGGCATTGGACTTGCTACAAAGCTGTTGGGCCTCCTGACGCTGGACCGAAAGGGGTATGTGGCCGATATCTCGTTTGGGGCTCGTACCTCAACCGATGATGCAGACGGTCAGGTCGTAGCCACTGCTGCTGTCCCAGAAAATCTGTGCGATGAAGAGTTTGCTCGCGCTGCATGCGCAAAGCTGGTGGGTACGGTAGACCAGCTTCCACCTACAGTTTCTGCAATCTCAGTTGATGGCAAACGTGCATATCAGCTTGTTCGTGAAGGTAAGACGCCAGAGCTCGCAGCTCGTAGAGTCTCTATTTACGACGCTACGCTTTTGGCGGTGCGCAAACCTTCTACTACGGATGAATCACTGGTATGGACGGTTGCGTTTGACGTTTCAAAAGGCACCTACATTAGAAGTATTGCTCGAGACCTTGGCCAGTCTCTTGGAACAGAGGCTCATATTAGTGGCCTAAGAAGGACGTTCTCTGGCCCCATTACGCTTGGTAGCTGCGCTTTATTAGAAGAGCTTGAACAAAGCCCAGCTCAGGTACTTGAAGCTAAACGCCTCAATCCAATTGAGGTTCTGGGATACCCTGTGCACAGGTTGACTGCAGCAGAATACAAGTGTGTTGAGGTTGGAAAACGTTTTGGTATTCCGGAAGATCTCTCTGAGATTGCTCATAACTCGCTGGTCAGCCTTGTGTGGAATGAGACTCTCGTAGGAATTTGGTCAAGGCAGGGTTCCTGCCTTGTCTGCCAGACAAACTTCTCTAAAGGTATTTTGTGTAAGTAA
PROTEIN sequence
Length: 314
VKRGASGINALIAVDKPLGLTSHDVVSRVRRAFGEKRVGHAGTLDPNASGVLVVGIGLATKLLGLLTLDRKGYVADISFGARTSTDDADGQVVATAAVPENLCDEEFARAACAKLVGTVDQLPPTVSAISVDGKRAYQLVREGKTPELAARRVSIYDATLLAVRKPSTTDESLVWTVAFDVSKGTYIRSIARDLGQSLGTEAHISGLRRTFSGPITLGSCALLEELEQSPAQVLEAKRLNPIEVLGYPVHRLTAAEYKCVEVGKRFGIPEDLSEIAHNSLVSLVWNETLVGIWSRQGSCLVCQTNFSKGILCK*