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64_010_scaffold_340_4

Organism: 64_010_Atopobium_48_11

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: 2343..3191

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8B1_ATOPD similarity UNIREF
DB: UNIREF100
  • Identity: 97.9
  • Coverage: 282.0
  • Bit_score: 546
  • Evalue 1.80e-152
LysR substrate-binding domain protein {ECO:0000313|EMBL:EWC94527.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 282.0
  • Bit_score: 555
  • Evalue 5.30e-155
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 97.9
  • Coverage: 282.0
  • Bit_score: 546
  • Evalue 5.50e-153

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Taxonomy

Atopobium sp. ICM42b → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 849
ATGGAGACCAACCTGCATAAATTCCAGGCTTTTACTTCTGCGGCGTATCACAGTAGCTTTACGGTGGTGGCAGAAGAGCTGGGATGCACTCAGTCATCAATTAGCCGTATGGTGGCAAGTCTAGAAAAAGAGTGGGATGTCCGCCTGTTTAACAGGCATGGCGGATATGTGAGTCTGACTCCTGAAGGAAAGACGCTTTTACCTGTTGCAGAAGAGGTGTGCCAGGCTTATAGCAAGCTGAGCAATCAAGTTAATCGCGTCAGCGCTATTGAGATGGGCAATCTTATTATTGCGGCACCTTCGAGCTTTCTTTCTAGAGCACTGCCAGGCCATCTGAAGAAGTACATGACCGATCATCCAAATATCAAAGTTGAAGTTATCGAGTGCACCTATGGAGAAGCTCTGCGTCTTATTAGCAAGGGTAAGGTGGATATTAGTTTTACTATGACCCGCGCAACTGAGCAGGGATTTACTTCAACTTTATTTGATCATGATGAGGTTATTGTTGTTTCTCAAAAGGGACATTACGAGAAGGACCTTGAGACAATTCCAGTTAAGCGTCTTATTGAGGAACCCTTTATTGTTGATATTGAGACAGCTCCCCTGCTTCAGAAACAACTTAAAAATGCGCGCATGACATTTGCGTCATCGGACTCGTTTACCATTATGTCCATGGTAGAGTCGGGTCTTGGTGTAAGTTTGTTGCCACTTGAGGCAACAAAAGGTACAAATTTTGATATTGATGTACATCATTTGGAGACTCCCGTACATCGTAATGTCTTTATTACACATCGTGTAAAAGGCGAGATGTCGCGCACTACAGAAGAGTTTTTAAAGTATTTGAGTTAA
PROTEIN sequence
Length: 283
METNLHKFQAFTSAAYHSSFTVVAEELGCTQSSISRMVASLEKEWDVRLFNRHGGYVSLTPEGKTLLPVAEEVCQAYSKLSNQVNRVSAIEMGNLIIAAPSSFLSRALPGHLKKYMTDHPNIKVEVIECTYGEALRLISKGKVDISFTMTRATEQGFTSTLFDHDEVIVVSQKGHYEKDLETIPVKRLIEEPFIVDIETAPLLQKQLKNARMTFASSDSFTIMSMVESGLGVSLLPLEATKGTNFDIDVHHLETPVHRNVFITHRVKGEMSRTTEEFLKYLS*