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66_004_scaffold_3

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Displaying items 31-60 of 399 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_004_scaffold_3_31
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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32920..33693
DNA (774bp) protein (258aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
Phosphate transporter ATP-binding protein n=1 Tax=Enterobacter cloacae subsp. dissolvens SDM RepID=I6SKJ6_ENTCL
pstB; phosphate transporter ATP-binding protein
66_004_scaffold_3_32
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33708..34433
DNA (726bp) protein (242aa)
Phosphate-specific transport system accessory protein PhoU n=566 Tax=Salmonella choleraesuis RepID=A9MX93_SALPB
transcriptional regulator
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1064551 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Thompson str. RM6836.;"
66_004_scaffold_3_33
Enterobacter asburiae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34572..35747
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Enterobacter sp. MGH 34 RepID=V3NML3_9ENTR
Glycoside hydrolase {ECO:0000313|EMBL:KJM15852.1}; TaxID=61645 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter asburiae.;"
yieL; putative xylanase; K07214 enterochelin esterase and related enzymes
66_004_scaffold_3_34
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35784..36449)
DNA (666bp) protein (222aa)
Phosphatase YieH n=2 Tax=Citrobacter RepID=C1ME40_9ENTR
Phosphatase YieH {ECO:0000313|EMBL:GAL59534.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
putative phosphatase/phosphohexomutase
66_004_scaffold_3_35
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36619..37956
DNA (1338bp) protein (446aa)
Inner membrane protein YicO n=1 Tax=Salmonella enterica subsp. enterica serovar Sloterdijk str. ATCC 15791 RepID=V1LLM6_SALET
Putative adenine permease PurP {ECO:0000313|EMBL:GAL59533.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
adenine permease PurP
66_004_scaffold_3_36
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38001..38567)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Salmonella enterica subsp. salamae serovar 58:l,z13,z28:z6 str. 00-0163 RepID=V1FE41_SALCE
Uncharacterized protein {ECO:0000313|EMBL:GAL59532.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
hypothetical protein
66_004_scaffold_3_37
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38602..39327)
DNA (726bp) protein (242aa)
phosphopantetheinyl transferase n=1 Tax=Enterobacter cloacae RepID=UPI00030C3F21
Uncharacterized protein {ECO:0000313|EMBL:GAL59531.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
phosphopantetheinyl transferase
66_004_scaffold_3_38
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39557..40921)
DNA (1365bp) protein (455aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
trmE; tRNA modification GTPase TrmE; K03650 tRNA modification GTPase [EC:3.6.-.-]
tRNA modification GTPase MnmE n=3 Tax=Citrobacter koseri RepID=MNME_CITK8
66_004_scaffold_3_39
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41026..42672)
DNA (1647bp) protein (549aa)
Membrane protein insertase YidC n=1 Tax=Enterobacter sp. (strain 638) RepID=YIDC_ENT38
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
inner membrane protein translocase component YidC; K03217 preprotein translocase subunit YidC
66_004_scaffold_3_40
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42896..43222)
DNA (327bp) protein (109aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
rnpA; ribonuclease P (EC:3.1.26.5)
Ribonuclease P protein component n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1YXC0_9ENTR
66_004_scaffold_3_41
Yokenella regensburgei, Yokenella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(43271..43411)
DNA (141bp) protein (47aa)
50S ribosomal protein L34 n=11 Tax=Enterobacteriaceae RepID=RL34_SERP5
50S ribosomal protein L34; K02914 large subunit ribosomal protein L34
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=1002368 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yokenella.;" source="Yokenella regensburgei ATCC 43003.;"
66_004_scaffold_3_42
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44019..45416
DNA (1398bp) protein (466aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Enterobacter lignolyticus (strain SCF1) RepID=E3G7M9_ENTLS
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
chromosomal replication initiator protein DnaA; K02313 chromosomal replication initiator protein
66_004_scaffold_3_43
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45421..46521
DNA (1101bp) protein (367aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
DNA polymerase III subunit beta; K02338 DNA polymerase III subunit beta [EC:2.7.7.7]
DNA polymerase III subunit beta n=1 Tax=Cedecea davisae DSM 4568 RepID=S3IZ35_9ENTR
66_004_scaffold_3_44
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46521..47594
DNA (1074bp) protein (358aa)
DNA replication and repair protein RecF n=1 Tax=Enterobacteriaceae bacterium (strain FGI 57) RepID=L0LWR2_ENTBF
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
DNA replication and repair protein RecF
66_004_scaffold_3_45
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47623..50037
DNA (2415bp) protein (805aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
gyrB; DNA gyrase subunit B; K02470 DNA gyrase subunit B [EC:5.99.1.3]
DNA gyrase subunit B n=2 Tax=Cronobacter condimenti RepID=K8A101_9ENTR
66_004_scaffold_3_46
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50198..51010
DNA (813bp) protein (271aa)
sugar phosphatase (EC:3.1.3.-); K07024
Phosphatase YidA n=6 Tax=Salmonella dublin RepID=B5FN04_SALDC
Phosphatase YidA {ECO:0000313|EMBL:GAL59521.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
66_004_scaffold_3_47
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51254..51943
DNA (690bp) protein (230aa)
Galactonate operon transcriptional repressor n=1 Tax=Salmonella enterica subsp. salamae serovar 58:l,z13,z28:z6 str. 00-0163 RepID=V1G030_SALCE
Galactonate operon transcriptional repressor {ECO:0000313|EMBL:GAL59520.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
dgoR; galactonate operon transcriptional repressor
66_004_scaffold_3_48
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51940..52818
DNA (879bp) protein (293aa)
dgoK; 2-oxo-3-deoxygalactonate kinase; K00883 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58]
2-dehydro-3-deoxygalactonokinase n=4 Tax=Escherichia coli RepID=E1HSA3_ECOLX
2-dehydro-3-deoxygalactonokinase {ECO:0000313|EMBL:GAL59519.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
66_004_scaffold_3_49
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52802..53419
DNA (618bp) protein (206aa)
dgoA; 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; K01631 2-dehydro-3-deoxyphosphogalactonate aldolase [EC:4.1.2.21]
2-dehydro-3-deoxy-6-phosphogalactonate aldolase n=1 Tax=Enterobacter cloacae UCICRE 3 RepID=V3IBX0_ENTCL
2-dehydro-3-deoxy-6-phosphogalactonate aldolase {ECO:0000313|EMBL:GAL59518.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
66_004_scaffold_3_50
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53416..54564
DNA (1149bp) protein (383aa)
D-galactonate dehydratase {ECO:0000256|HAMAP-Rule:MF_01289}; Short=GalD {ECO:0000256|HAMAP-Rule:MF_01289};; EC=4.2.1.6 {ECO:0000256|HAMAP-Rule:MF_01289};; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
galactonate dehydratase; K01684 galactonate dehydratase [EC:4.2.1.6]
D-galactonate dehydratase n=5 Tax=Escherichia coli RepID=E1HSA1_ECOLX
66_004_scaffold_3_51
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54656..55966
DNA (1311bp) protein (437aa)
Nitrate/nitrite transporter n=1 Tax=Cronobacter muytjensii 530 RepID=K8AT77_9ENTR
Major facilitator superfamily transporter RhmT {ECO:0000313|EMBL:GAL59516.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
hypothetical protein
66_004_scaffold_3_52
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55979..56911
DNA (933bp) protein (311aa)
D-3-phosphoglycerate dehydrogenase n=1 Tax=Cronobacter muytjensii 530 RepID=K8AA11_9ENTR
Glyoxylate/hydroxypyruvate reductase B {ECO:0000313|EMBL:GAL59515.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
gyaR; Glyoxylate reductase
66_004_scaffold_3_53
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56971..58200
DNA (1230bp) protein (410aa)
Putative ATP/GTP-binding protein n=1 Tax=Enterobacter sp. (strain 638) RepID=A4W4S1_ENT38
Uncharacterized protein {ECO:0000313|EMBL:GAL59514.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
ATP/GTP-binding protein
66_004_scaffold_3_54
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58216..58545)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Enterobacter cloacae BWH 31 RepID=V3I9N8_ENTCL
Uncharacterized protein {ECO:0000313|EMBL:GAL59513.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
hypothetical protein
66_004_scaffold_3_55
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58845..59258
DNA (414bp) protein (138aa)
Small heat shock protein IbpA n=2 Tax=Enterobacteriaceae RepID=M9W6M6_RAOOR
Small heat shock protein IbpA {ECO:0000256|HAMAP-Rule:MF_02000}; 16 kDa heat shock protein A {ECO:0000256|HAMAP-Rule:MF_02000}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
heat shock protein IbpA
66_004_scaffold_3_56
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59368..59796
DNA (429bp) protein (143aa)
Small heat shock protein IbpB n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V1T2_ESCHE
Small heat shock protein IbpB {ECO:0000256|HAMAP-Rule:MF_02001}; 16 kDa heat shock protein B {ECO:0000256|HAMAP-Rule:MF_02001}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
ibpB; Small heat shock protein ibpB; K04081 molecular chaperone IbpB
66_004_scaffold_3_57
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59956..60303
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8ACJ0_CITK8
Uncharacterized protein {ECO:0000313|EMBL:GAL59510.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
hypothetical protein; K00389 putative membrane protein
66_004_scaffold_3_58
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60306..60677
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Yokenella regensburgei ATCC 43003 RepID=G9Z192_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:GAL59509.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
hypothetical protein
66_004_scaffold_3_59
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60729..61814
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Enterobacter sp. MGH 25 RepID=V3Q6E0_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:GAL59508.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
hypothetical protein
66_004_scaffold_3_60
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61717..62874)
DNA (1158bp) protein (386aa)
Multidrug resistance protein D n=1 Tax=Enterobacter cloacae BWH 31 RepID=V3I713_ENTCL
Multidrug resistance protein EmrD {ECO:0000313|EMBL:GAL59507.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
emrD; multidrug resistance protein D
Displaying items 31-60 of 399 in total

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