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66_004_scaffold_59_4

Organism: 66_004_Clostridium_perfringens_28_55

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: comp(3527..4213)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.8
  • Coverage: 228.0
  • Bit_score: 451
  • Evalue 8.70e-124
RNA pseudouridine synthase; K06182 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] similarity KEGG
DB: KEGG
  • Identity: 97.8
  • Coverage: 228.0
  • Bit_score: 450
  • Evalue 4.40e-124
Pseudouridine synthase n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CPW5_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 98.2
  • Coverage: 228.0
  • Bit_score: 451
  • Evalue 4.80e-124

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 687
ATGAGAATAAACAAGCTTTTTAGCAATTTTGGGATATGCTCTAGAAAAGAAACTAATAAAATTATTAGAGAGGGAAGAGTTATTGTTAATGGCAAGCCATGTATTGAGGGGCAATGGGTTGAATTAAGTGATGAAATACTTTTAGATGGGAAACCCTTAGTTCCAAAGGAAAAGATTTATATAGCACTTAATAAGCCTGTAGGAGTTGTATGTACTGCTGCAGAAGAAGTTAAGGATAATATAATAGATTATTTAGGGATAGATGATTATGTTTTTCCAATAGGAAGGCTAGATAAGGATTCTCAAGGATTAATAATTTTAACTAATGATGGAGATTTAGCAAATGAAGTTTTAGAAGCAGAAAATAACCATGAAAAGGAATATGTGGTAACCTTAGATCAACCTTTTTATGATGATTTTATTGAAAAGATGGAGCAGGGTGTTGAAATATTAGGACAAGTAACAAAACCTTGTAAAGTTAACAGAATAAATGAAAATACCTATTCAATAATATTAACTCAAGGTTTAAATAGACAAATAAGAAGAATGAGTAAGGTTTTTGGCTTTAATGTAGTTAAGTTAGAGAGAATTAGAATTCTTAATATAACTCTTGAAGACATAGAATATGGAAAGTGGAGATATATAAATAGGGAAGAAATTGAGATTTTAAAAAAACTTATAAAATAA
PROTEIN sequence
Length: 229
MRINKLFSNFGICSRKETNKIIREGRVIVNGKPCIEGQWVELSDEILLDGKPLVPKEKIYIALNKPVGVVCTAAEEVKDNIIDYLGIDDYVFPIGRLDKDSQGLIILTNDGDLANEVLEAENNHEKEYVVTLDQPFYDDFIEKMEQGVEILGQVTKPCKVNRINENTYSIILTQGLNRQIRRMSKVFGFNVVKLERIRILNITLEDIEYGKWRYINREEIEILKKLIK*