ggKbase home page

66_004_scaffold_71_22

Organism: 66_004_Clostridium_perfringens_28_55

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: 26838..29852

Top 3 Functional Annotations

Value Algorithm Source
colA; collagenase; K01387 microbial collagenase [EC:3.4.24.3] similarity KEGG
DB: KEGG
  • Identity: 99.3
  • Coverage: 999.99
  • Bit_score: 2044
  • Evalue 0.0
Microbial collagenase n=2 Tax=Clostridium perfringens RepID=B1RQY6_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 999.99
  • Bit_score: 2050
  • Evalue 0.0
Collagenase {ECO:0000313|EMBL:EIA18611.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 999.99
  • Bit_score: 2048
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3015
ATGAATTATAGTGATCTAGTTGAATTAATAAAAACAATAAGTTATGAAAACGTACCAGACTTATTTAATTTTAATGATGGTTCATATACTTTCTTTAGTAATAGAGATCGTGTACAAGCTATAATATATGGTCTAGAGGATAGTGGAAGAACTTATACAGCAGATGATGATAAGGGAATTCCAACTTTAGTTGAGTTTTTAAGAGCTGGATATTATTTAGGATTTTATAATAAACAATTATCATACCTAAATACACCACAGTTAAAAAATGAGTGTTTACCAGCTATGAAAGCGATTCAATATAATAGTAATTTTAGATTAGGAACAAAGGCGCAAGATGGAGTTGTTGAGGCTTTAGGAAGACTTATAGGTAATGCTTCAGCAGATCCAGAAGTTATTAATAATTGCATATATGTTTTAAGTGATTTTAAAGATAATATAGATAAGTATGGTTCTAACTATAGCAAGGGAAATGCAGTATTCAACCTTATGAAAGGTATTGATTATTATACTAATTCAGTAATATACAATACTAAGGGATATGATGCTAAAAACACTGAGTTCTATAATAGAATAGATCCATATATGGAAAGATTAGAAAGTTTATGTACAATAGGTGATAAGTTAAATAATGATAATGCTTGGCTTGTAAATAATGCCTTATATTACACAGGTAGAATGGGTAAGTTTAGAGAAGACCCATCAATATCTCAAAGAGCTTTAGAAAGAGCTATGAAAGAGTATCCTTATTTATCATATCAATATATTGAAGCTGCCAATGACTTAGATTTAAATTTTGGTGGCAAAAATTCATCAGGAAATGATATAGATTTCAATAAGATAAAAGCAGATGCAAGGGAAAAATATCTTCCAAAAACATATACTTTTGATGATGGTAAATTTGTAGTAAAAGCTGGTGATAAAGTAACAGAGGAAAAGATAAAAAGATTATACTGGGCTTCAAAGGAAGTTAAGGCTCAATTCATGAGAGTAGTTCAAAATGATAAGGCTTTAGAAGAGGGGAATCCAGATGATATTTTAACTGTTGTTATTTATAACTCACCAGAAGAGTATAAATTAAATCGTATAATAAATGGATTTAGTACTGATAATGGTGGTATATATATTGAAAACATAGGAACTTTCTTTACTTATGAAAGAACACCAGAGGAAAGTATATATACATTAGAAGAATTATTCCGTCATGAATTTACTCACTATCTTCAAGGTAGATATGTAGTTCCTGGAATGTGGGGACAAGGAGAATTCTATCAAGAGGGAGTTTTAACTTGGTATGAAGAAGGAACAGCAGAGTTCTTTGCAGGTTCAACTAGAACTGATGGAATAAAACCAAGAAAATCAGTTACACAAGGATTAGCTTACGATAGAAATAATAGAATGTCTTTATATGGTGTATTACATGCTAAATATGGCTCATGGGATTTCTATAATTATGGATTTGCTCTATCAAACTACATGTACAACAATAACATGGGAATGTTTAATAAGATGACAAATTACATAAAGAATAATGATGTGTCTGGTTATAAAGATTATATTGCATCAATGAGTAGTGATTACGGATTAAATGATAAATATCAAGACTATATGGATTCTTTATTAAACAATATTGACAACTTAGATGTTCCTTTAGTTTCAGATGAATATGTAAATGGACATGAAGCTAAGGATATAAATGAAATAACTAAGGATATAAAAGAAGTTTCAAATATAAAAGATCTTTCTAGTAATGTTGAAAAGTCTCAATTCTTTACTACTTACGATATGAGAGGAACATATGTAGGGGGAAGAAGCCAAGGGGAAGAAAATGACTGGAAAGATATGAATTCTAAGTTAAATGATATATTAAAAGAATTATCTAAAAAGAGTTGGAATGGTTATAAAACAGTTACTGCATACTTTGTAAACCATAAAGTGGATGGAAATGGTAACTATGTTTATGATGTTGTATTCCATGGAATGAATACAGATACAAATACGGATGTTCATGTTAATAAAGAGCCTAAGGCTGTTATAAAATCTGATTCTTCAGTAATAGTTGAAGAAGAAATAAACTTTGATGGAACAGAGTCAAAAGATGAAGATGGTGAAATCAAAGCTTATGAATGGGAATTTGGAGATGGAGAAAAATCTAATGAGGCTAAAGCCACTCATAAGTATAATAAAACTGGAGAATATGAAGTAAAATTAACAGTTACAGATAATAACGGTGGAATAAATACTGAAAGTAAAAAGATAAAAGTAGTAGAAGATAAACCTGTTGAAGTTATAAATGAAAGCGAGCCTAACAATGATTTTGAAAAGGCTAACCAAATAGCTAAATCTAATATGTTAGTTAAGGGTACTTTATCAGAAGAGGATTATTCAGATAAATATTATTTTGACGTAGCTAAAAAAGGCAATGTTAAAATAACTCTTAATAATTTAAATTCAGTAGGAATAACTTGGACACTTTATAAAGAGGGAGACCTAAACAATTATGTTTTATATGCAACTGGAAATGATGGAACAGAATTAAAGGGTGAAAAGACTTTAGAACCTGGAAGATACTATTTAAGTGTATATACTTATGATAATCAATCAGGAGCTTACACAGTAAATGTAAAAGGAAATCTTAAAAATGAAGTTAAAGAAACAGAAAAGGATGCTATAAAAGAACTTGAAAATAACAATGATTTTGATAAAGCTATGAAGGTAGATAGTAATAGCAAAATAGTTGGAACATTAAGCAATGATGATCTTAAGGATATTTATAGCATAGATATACAAAATCCAAGTGACTTAAACATAGTAGTTGAAAACTTAGATAATATAAAAATGAACTGGTTATTATATTCAGCTGATGATTTAAGTAACTATGTGGATTACGCTAATGCAGATGGAAATAAATTAAGTAACACTTGTAAGTTAAATCCAGGTAAATATTACTTATGTGTTTATCAATTTGAAAACTCAGGTACTGGAAATTACACAGTGAACTTACAAAACAAATAA
PROTEIN sequence
Length: 1005
MNYSDLVELIKTISYENVPDLFNFNDGSYTFFSNRDRVQAIIYGLEDSGRTYTADDDKGIPTLVEFLRAGYYLGFYNKQLSYLNTPQLKNECLPAMKAIQYNSNFRLGTKAQDGVVEALGRLIGNASADPEVINNCIYVLSDFKDNIDKYGSNYSKGNAVFNLMKGIDYYTNSVIYNTKGYDAKNTEFYNRIDPYMERLESLCTIGDKLNNDNAWLVNNALYYTGRMGKFREDPSISQRALERAMKEYPYLSYQYIEAANDLDLNFGGKNSSGNDIDFNKIKADAREKYLPKTYTFDDGKFVVKAGDKVTEEKIKRLYWASKEVKAQFMRVVQNDKALEEGNPDDILTVVIYNSPEEYKLNRIINGFSTDNGGIYIENIGTFFTYERTPEESIYTLEELFRHEFTHYLQGRYVVPGMWGQGEFYQEGVLTWYEEGTAEFFAGSTRTDGIKPRKSVTQGLAYDRNNRMSLYGVLHAKYGSWDFYNYGFALSNYMYNNNMGMFNKMTNYIKNNDVSGYKDYIASMSSDYGLNDKYQDYMDSLLNNIDNLDVPLVSDEYVNGHEAKDINEITKDIKEVSNIKDLSSNVEKSQFFTTYDMRGTYVGGRSQGEENDWKDMNSKLNDILKELSKKSWNGYKTVTAYFVNHKVDGNGNYVYDVVFHGMNTDTNTDVHVNKEPKAVIKSDSSVIVEEEINFDGTESKDEDGEIKAYEWEFGDGEKSNEAKATHKYNKTGEYEVKLTVTDNNGGINTESKKIKVVEDKPVEVINESEPNNDFEKANQIAKSNMLVKGTLSEEDYSDKYYFDVAKKGNVKITLNNLNSVGITWTLYKEGDLNNYVLYATGNDGTELKGEKTLEPGRYYLSVYTYDNQSGAYTVNVKGNLKNEVKETEKDAIKELENNNDFDKAMKVDSNSKIVGTLSNDDLKDIYSIDIQNPSDLNIVVENLDNIKMNWLLYSADDLSNYVDYANADGNKLSNTCKLNPGKYYLCVYQFENSGTGNYTVNLQNK*