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69_008_scaffold_24

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Displaying items 91-120 of 169 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
69_008_scaffold_24_91
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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99677..100384
DNA (708bp) protein (236aa)
Uncharacterized protein n=56 Tax=Escherichia RepID=B1LL98_ECOSM
ybeU; hypothetical protein
Putative tRNA ligase {ECO:0000313|EMBL:CDC78050.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
69_008_scaffold_24_92
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

100381..101832
DNA (1452bp) protein (484aa)
Uncharacterized protein n=34 Tax=Escherichia coli RepID=D2NF21_ECOS5
hypothetical protein
Molecular chaperone DnaJ {ECO:0000313|EMBL:AJO82530.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_008_scaffold_24_93
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(101892..103562)
DNA (1671bp) protein (557aa)
Chaperone protein hscC n=39 Tax=Escherichia coli RepID=G0D0Z9_ECOLX
Hsp70 family protein {ECO:0000313|EMBL:KEJ61915.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
ybeW; Chaperone protein hscC; K04045 molecular chaperone HscC
69_008_scaffold_24_94
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(103646..104581)
DNA (936bp) protein (312aa)
Pyrimidine-specific ribonucleoside hydrolase RihA {ECO:0000256|HAMAP-Rule:MF_01431, ECO:0000256|SAAS:SAAS00014539}; EC=3.2.-.- {ECO:0000256|HAMAP-Rule:MF_01431, ECO:0000256|SAAS:SAAS00015510};; Cytidine/uridine-specific hydrolase {ECO:0000256|HAMAP-Rule:MF_01431}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
Pyrimidine-specific ribonucleoside hydrolase RihA n=52 Tax=Escherichia RepID=D2NF23_ECOS5
putative purine nucleoside hydrolase
69_008_scaffold_24_95
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(104699..105424)
DNA (726bp) protein (242aa)
Glutamate/aspartate ABC transporter ATP-binding component n=53 Tax=Escherichia RepID=D2NF24_ECOS5
amino acid ABC transporter ATP-binding protein
ATP-binding protein of glutamate/aspartate transport system {ECO:0000313|EMBL:CDN81023.1}; GltL protein; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
69_008_scaffold_24_96
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(105424..106098)
DNA (675bp) protein (225aa)
Glutamate/aspartate transport system permease protein GltK n=1217 Tax=Enterobacteriaceae RepID=GLTK_ECO57
gltK; glutamate/aspartate transporter permease gltK; K10002 glutamate/aspartate transport system permease protein
Glutamate/aspartate transport system permease protein GltK {ECO:0000313|EMBL:EGI42015.1}; TaxID=656444 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TA280.;"
69_008_scaffold_24_97
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(106098..106838)
DNA (741bp) protein (247aa)
Putative ATP synthase F0, A subunit (Fragment) n=2 Tax=Escherichia coli RepID=E5ZUS0_ECOLX
glutamate/aspartate ABC transporter, permease protein; K10003 glutamate/aspartate transport system permease protein
Amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein {ECO:0000313|EMBL:KDU29324.1}; TaxID=1444252 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-373-03_S4_C2.;"
69_008_scaffold_24_98
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(107008..107916)
DNA (909bp) protein (303aa)
Glutamate/aspartate ABC transporter substrate binding component n=51 Tax=Escherichia RepID=D2NF27_ECOS5
amino acid transporter
Amino acid transporter {ECO:0000313|EMBL:AJO82536.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_008_scaffold_24_99
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

108370..110247
DNA (1878bp) protein (626aa)
40-residue YVTN family beta-propeller n=29 Tax=Escherichia coli RepID=L2ZRU0_ECOLX
Escherichia coli O25b:H4-ST131 str. EC958 chromosome, complete genome; Uncharacterized protein {ECO:0000313|EMBL:CDN81027.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
hypothetical protein
69_008_scaffold_24_100
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(110374..111912)
DNA (1539bp) protein (513aa)
lnt; apolipoprotein N-acyltransferase; K03820 apolipoprotein N-acyltransferase [EC:2.3.1.-]
Apolipoprotein N-acyltransferase {ECO:0000256|SAAS:SAAS00250216}; EC=2.3.1.- {ECO:0000256|SAAS:SAAS00088950};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Apolipoprotein N-acyltransferase n=27 Tax=Escherichia coli RepID=G0D106_ECOLX
69_008_scaffold_24_101
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(111937..112815)
DNA (879bp) protein (293aa)
Magnesium and cobalt efflux protein CorC n=1409 Tax=Enterobacteriaceae RepID=CORC_ECO57
corC; ion transport; K06189 magnesium and cobalt transporter
CBS domain pair family protein {ECO:0000313|EMBL:EHX35086.1}; TaxID=868192 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12B.;"
69_008_scaffold_24_102
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(112905..113372)
DNA (468bp) protein (156aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=749531 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 69-1.;"
Endoribonuclease YbeY n=317 Tax=Escherichia RepID=YBEY_ECO27
ybeY; putative metalloprotease; K07042 probable rRNA maturation factor
69_008_scaffold_24_103
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(113369..114448)
DNA (1080bp) protein (360aa)
PhoH-like protein n=674 Tax=Enterobacteriaceae RepID=C3TJ62_ECOLX
PhoH family protein; K06217 phosphate starvation-inducible protein PhoH and related proteins
PhoH-like protein {ECO:0000313|EMBL:EOW09636.1}; TaxID=1182701 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE102.;"
69_008_scaffold_24_104
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(114562..115986)
DNA (1425bp) protein (475aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=868138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=71 Tax=Escherichia RepID=B7UKU4_ECO27
(dimethylallyl)adenosine tRNA methylthiotransferase
69_008_scaffold_24_105
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

116132..117307
DNA (1176bp) protein (392aa)
Uncharacterized protein n=36 Tax=Escherichia coli RepID=D2NF34_ECOS5
ubiF; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase
Uncharacterized protein {ECO:0000313|EMBL:BAI54140.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_008_scaffold_24_trna_6
unknown

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comp(117465..117536)
DNA (72bp)
transferRNA Gln
69_008_scaffold_24_trna_5
unknown

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comp(117577..117648)
DNA (72bp)
transferRNA Gln
69_008_scaffold_24_trna_4
unknown

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comp(117700..117773)
DNA (74bp)
transferRNA Met
69_008_scaffold_24_trna_3
unknown

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comp(117792..117863)
DNA (72bp)
transferRNA Gln
69_008_scaffold_24_trna_2
unknown

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comp(117901..117972)
DNA (72bp)
transferRNA Gln
69_008_scaffold_24_trna_1
unknown

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comp(118071..118144)
DNA (74bp)
transferRNA Met
69_008_scaffold_24_106
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

118478..118915
DNA (438bp) protein (146aa)
Uncharacterized protein n=49 Tax=Escherichia RepID=D2NF35_ECOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDL49108.1}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
69_008_scaffold_24_107
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(118957..120621)
DNA (1665bp) protein (555aa)
asnB; asparagine synthetase B; K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
Asparagine synthetase n=9 Tax=Escherichia coli RepID=F4SVZ2_ECOLX
Asparagine synthetase B [glutamine-hydrolyzing] {ECO:0000313|EMBL:EQX31227.1}; TaxID=1281200 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UMEA 3162-1).;"
69_008_scaffold_24_108
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(120877..121629)
DNA (753bp) protein (251aa)
Ribonucleotide monophosphatase NagD n=1343 Tax=Enterobacteriaceae RepID=NAGD_ECO57
nagD; UMP phosphatase; K02566 NagD protein
HAD-superhydrolase, subIIA family protein {ECO:0000313|EMBL:EHU16086.1}; TaxID=868135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1C.;"
69_008_scaffold_24_109
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(121677..122897)
DNA (1221bp) protein (407aa)
N-acetylglucosamine repressor n=1354 Tax=Enterobacteriaceae RepID=NAGC_ECO57
nagC; DNA-binding transcriptional dual regulator; K02565 N-acetylglucosamine repressor
Protein mlc {ECO:0000313|EMBL:EFZ56441.1}; TaxID=670890 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli LT-68.;"
69_008_scaffold_24_110
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(122906..124054)
DNA (1149bp) protein (383aa)
nagA; N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25); K01443 N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=868139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2B.;"
N-acetylglucosamine-6-phosphate deacetylase n=477 Tax=Escherichia RepID=A1A8T6_ECOK1
69_008_scaffold_24_111
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(124114..124914)
DNA (801bp) protein (267aa)
nagB; glucosamine-6-phosphate deaminase (EC:3.5.99.6); K02564 glucosamine-6-phosphate deaminase [EC:3.5.99.6]
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029496};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
Glucosamine-6-phosphate deaminase n=1150 Tax=Enterobacteriaceae RepID=NAGB_ECO24
69_008_scaffold_24_112
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

125247..127193
DNA (1947bp) protein (649aa)
PTS system, N-acetylglucosamine-specific IIA component / PTS system,N-acetylglucosamine-specific IIB component / PTS system, N-acetylglucosamine-specific IIC component {ECO:0000313|EMBL:CDL49118.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CDL49118.1};; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
PTS system N-acetylglucosamine-specific IIABC components n=35 Tax=Escherichia coli RepID=D2NF42_ECOS5
PTS system N-acetylglucosamine-specific IIABC components
69_008_scaffold_24_113
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(127282..128562)
DNA (1281bp) protein (427aa)
Uncharacterized protein n=50 Tax=Escherichia RepID=D2NF43_ECOS5
hypothetical protein
Citrate transporter family protein {ECO:0000313|EMBL:KEJ61255.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
69_008_scaffold_24_114
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(128576..129046)
DNA (471bp) protein (157aa)
Uncharacterized protein n=52 Tax=Escherichia RepID=D2NF44_ECOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC78160.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
Displaying items 91-120 of 169 in total

View Taxonomy