ggKbase home page

69_008_scaffold_192_12

Organism: 69_008_Peptoniphilus_harei_30_22

near complete RP 49 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38 MC: 1
Location: comp(12155..13048)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043051}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043054};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sc similarity UNIPROT
DB: UniProtKB
  • Identity: 67.8
  • Coverage: 295.0
  • Bit_score: 414
  • Evalue 1.20e-112
tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] similarity KEGG
DB: KEGG
  • Identity: 41.0
  • Coverage: 288.0
  • Bit_score: 226
  • Evalue 1.30e-56
tRNA pseudouridine synthase B n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002889E6A similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 295.0
  • Bit_score: 579
  • Evalue 1.50e-162

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Peptoniphilus harei → Peptoniphilus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 894
ATGAATGGCTTAATAATTTTTGATAAAGAAAAGGGAATTACTTCTCATGATTTAGTCTACAAAGTTAGAAAAAAGACAGGGATAAAAAAAGTTGGTCATGCAGGTACTCTTGATCCCATGGCAACTGGTGTACTCATTATAGCAATTGGTAAAGCTACAAAAGTGAACGAGTATTTACTTTTAAAAGACAAAAAATATATTGCAAAGATAAAACTTGGAATCTTAACAGATACTTTTGATATAACAGGAAATATTTTAGAGAAAGAAAATGTATCTGTATTAAAAAAAGATATAGAAGAAGTTTTGAAAAGATTTACAGGTAAGATGAGCCAAACTCCTCCAATTTATTCCGCATTAAAAGTTAATGGAAAAAAGCTTTATGAATATGCTAGAGAAGGTAAAGAAGTTAAAATTAAAAATAGAAATATTGAAATTTTTGAAAATAAACTAATTGATTTTAATGGAAAAGACGAGTTTTCTATTGAAATTGAAGTTTCTAAAGGTACCTATATAAGATCAGTTGCTTATGATATTGGAAAAGCAGTAGGGACTTATGGTACTATAACTGAACTAAGAAGAATAAAGAGTGGGAATTTTGATATAGAAAATTCCATAAAAATCTCTGATTTTGAAAATATGAGCTTAGACGAATTAAAATCAAATTTGATTCCCATGGAATTAGCTTTAGAAAATTTAAAAAGAATCGAAATACCAAAAAGCTTTAAACAAAACTTTCTAAATGGACAATTTTACAAGCTACAAGATAAGTGTGAAATTGAAAATTACAGAGTTTATTGTGAAGACTTGTTTTTAGGAATTGGTGAAATTCGAATAGAAAATGGTAGTTTTTTTCTTAAAATGAAGAAAAAATTAATAGGTGATTTATGAGAATAA
PROTEIN sequence
Length: 298
MNGLIIFDKEKGITSHDLVYKVRKKTGIKKVGHAGTLDPMATGVLIIAIGKATKVNEYLLLKDKKYIAKIKLGILTDTFDITGNILEKENVSVLKKDIEEVLKRFTGKMSQTPPIYSALKVNGKKLYEYAREGKEVKIKNRNIEIFENKLIDFNGKDEFSIEIEVSKGTYIRSVAYDIGKAVGTYGTITELRRIKSGNFDIENSIKISDFENMSLDELKSNLIPMELALENLKRIEIPKSFKQNFLNGQFYKLQDKCEIENYRVYCEDLFLGIGEIRIENGSFFLKMKKKLIGDL*E*