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71_003_scaffold_236_20

Organism: 71_003_Bifidobacterium_scardovii_65_254

near complete RP 52 / 55 MC: 7 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: comp(21694..22611)

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway, VirD4 component n=1 Tax=Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029 / RHS 1) RepID=C7N489_SLAHD similarity UNIREF
DB: UNIREF100
  • Identity: 49.8
  • Coverage: 305.0
  • Bit_score: 276
  • Evalue 2.80e-71
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30670.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 305.0
  • Bit_score: 602
  • Evalue 2.40e-169
type IV secretory pathway, VirD4 component similarity KEGG
DB: KEGG
  • Identity: 49.8
  • Coverage: 305.0
  • Bit_score: 276
  • Evalue 8.80e-72

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Taxonomy

Bifidobacterium scardovii → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 918
ATGTACCTGTCTGCCTTCATCGCGTACACGATGCAGTGCCTGCCGCGTGACGAGCAGACCTTCGCCTCGGTGCAGCGCATGGTCAGCGTGATGGGTGAGGACTCCATCGCCATCATGATGGAGGAGATGTGCGAGACCGACCCGCAAGGCATGACCGCCCGGCGGTGGCGCGCCATCAAGGCCTCGCAGAAGGCGGATCGGATGGATTCCAGCATCCGCGGCATCCTGGAATCGAAGATCGCGCCGATGTCGTTCAGCGGTGCCGACGGCATGTTCACGCGTCCGGAACGCATCGACTTCGCCAAGCTCACCACGGAGCGCTGGGCCGTGTTCGTCAATGTGAGCGACACCGACCGTTCGATGGACGGCATGGTCAACCTGTTCTACACGCAGGCGCTGCAGCAGTTGTGCCGGTTCGCCGACACCTCCTGCGAAGGCAGCCGGCTGCCGGTGCCGGTGCGCCTGTATCTCGACGATTTCGCCACGAATTGCCGTATCCCCGATTTCGACAAGGTCATCGCGGTGATCCGCTCGCGCGGGATCTCCGTCAGTGTGATCCTGCAATCGCTCACCCAGCTGGAGGGCATGTATGGCGTCGCCGTGGCCTCCAGCATCGCCAACAACTGCGACCACTGGCTGTATCTGGGCGGTCAGGACGTGAACACGGCCAAGCAGATCAGCGTCAAGGCCTGCCGGACGTTGGACACGGTGATGCAGATGCCGCTCGACCGGGCCTACCTGTTCGAGCGCGGCCGCAAGCCGGAGCTGGTGCGTCCGTATGATCTGACCGCGCATCCCCTGTACCGCGAAACGCCTGAAGGCCGCCGGGCTGGGGGCGTGCGCGCGGCCGCATGCGCCGATGCGGCCGCCGACGAGACCGTCGCTGAGCTCGCCGCACGGGCGCCGTACGAGCGATGA
PROTEIN sequence
Length: 306
MYLSAFIAYTMQCLPRDEQTFASVQRMVSVMGEDSIAIMMEEMCETDPQGMTARRWRAIKASQKADRMDSSIRGILESKIAPMSFSGADGMFTRPERIDFAKLTTERWAVFVNVSDTDRSMDGMVNLFYTQALQQLCRFADTSCEGSRLPVPVRLYLDDFATNCRIPDFDKVIAVIRSRGISVSVILQSLTQLEGMYGVAVASSIANNCDHWLYLGGQDVNTAKQISVKACRTLDTVMQMPLDRAYLFERGRKPELVRPYDLTAHPLYRETPEGRRAGGVRAAACADAAADETVAELAARAPYER*