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71_003_scaffold_162_6

Organism: 71_003_Escherichia_coli_51_127

partial RP 33 / 55 MC: 4 BSCG 36 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(5952..8171)

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion system Vgr family protein n=2 Tax=Escherichia coli RepID=L3EHE1_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 99.9
  • Coverage: 739.0
  • Bit_score: 1497
  • Evalue 0.0
Rhs element Vgr family protein {ECO:0000313|EMBL:EMX54764.1}; TaxID=1116139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP020980.2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 739.0
  • Bit_score: 1490
  • Evalue 0.0
type VI secretion protein Vgr similarity KEGG
DB: KEGG
  • Identity: 89.4
  • Coverage: 739.0
  • Bit_score: 1346
  • Evalue 0.0

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2220
ATGAGTTTTGTATCTACGGGTAATAAATCTGCCGGGAGTCATGGACCAGAGATCACTACGCCGCCGATAGCCGGAGAAAGTGGTGGTATGAGCGCAGGTTCAGCTGCAACCGGTGTTGCTGATGCCGCCGAACAGATGGCAGAACAGGCAGCGGCGGATCTGTTTGGGGCGTTGCCAGAACCTTCTGGGCTGGTAAAAGCGGCTGTTGCAGCAGCACAGGCCGCCGCCGCCGTGGCAGGGATATCGGATATAACGGGTGCCGCTCAGGATGCGGCGGTGTCGCTTGCTGCCGGTGGACCGGGAGCGCATAACGTCACGGTAAGTGGTAGCGCTGTGCCGCCGCAGATGCTGCTTTTTGCCAGTATAAATGGTTCGGAGAAACTTGGCAGCCTGTTTACCTACATCGTACAGCTTAAAACGCCCGACACCCTGAATCTGGGCTATGTCTCCCCTGCTGCCAACCTCCCGCTTAAACCAATGGTGGGCAAAGACCTGTGCGTCAATATCGAACTGGACGGTGGCGGCAAACGGTATATCAGCGGGCTGGTGACGGCGGCGCGGGTAGTGGGCCATGAGGGCCGCTCGGTAACGTATGAATTACGCATTGAGCCGTGGCTGAAACTGCTGACCCACAGCAGCGACTACAAGGCGTTCCAGAATAAAACGGTAGTGGACATCCTGGATGAAGTGCTGGCGGATTATGACTTTCCGGTGGAAAAACGGCTGGTGGAAAACTACCCGATCCGCACCTGGCAGGTGCAGTACAGTGAAACGGATTTTGATTTCATCCAGCGCCTGATGCAGGAATGGGGTATCTACTGGTGGTTTGAGCACAGCGAGAACAGCCATACGCTGGTGCTGGCGGACGCCATCAGTGCCCACAAAGCGTGCCCGGACTCGCCGCTGGTGGAGTGGCACCAGGAAGGGCTGAAGCTGGATAAGGAGTTTATCCACACCATTACGGCCAGTGAGCGACTGCGCACCGGGCAGTGGGTACTAGACGATTTCGATTTTACAAAACCACGTTCGTTGCTGGCAAACACCGTGGCAAACCCGCGTGAAACCGGCCACGCCACCTACGAGCATTACGAATGGCCGGGGGATTACTTCGACAAGGGCGAAGGCGAGATGCTGACGCGCATCCGTATGGAAGCGCAGCGCAGCCCCGGTAGCCGGGTTGGCGGGGCGGGGAATATCCGCACCCTCATGACGGGTTACACCTTTACATTGATGAATCATCCAACGGCAGAGGTCAACCAGGAATACCTGCTGGTACAAACCACGCTGTTTTTACGGGACAACGCGCAGCACAGCGGCCAGGATCAGCATTTTACCTATGTCACCACGTTTGAACTGCACCCCACCAGCGAAGTTTACCGCCCACAGCGAACCCTGAGCAAACCCCACACCAAAGGCCCGCAGAGCGCCATCGTCACCGGCCCGGCGGGGCAGGAAATCTGGACGGATAAATATGGCCGGGTGAAGGTGCAGTTTGGCTGGGATCGCTACGGTAAGAATGACGAAAACAGCTCCTGCTGGATCCGCGTCAGCTACCCGTGGGCGGGGAAAGGATTCGGGATGATCCAGATCCCGCGCATCGGCCAGGAAGTGCTGGTGGATTTCAAAAACGGCGACCCGGATTTACCGATTATCGTGGGGCGCACCTACAACCAGGACACCATGCCGCCGTGGGGGCTACCGGGCATGGCGTCTCAAAGCGGGATATTCAGCCACTCGCTGTATGGCGGGCCGACCAACGGAAACATGCTGCGCTTTGACGATAAAACGGGTGCGGAAGAAGTGAGGTTTCTTGCGGAGAAAGATCTGAATACCGTAGTGAAAAATAACGAAACACACACGGTAAAGGCAGATCGGACGAAAACCATCATTTATAACGAAACATCCACGGTAAAAATCGACCGCACGGAATTTGTTGATGGCAAGCATACCGAAACCATTAAAGGAGATCGGGATATTACAGTGACTGAGGGTAAACAATCACTGACGGTGAAAACAGGCAATCGTGAGATAAAAGTGGAGACGGGAATCTGCACGGAGACGGTAGAAGGGGATATTACTATCACGTCTAAAACCGGGGCGATACACCTTACCGCAGCAACGCAGATAAAGTTGACTGTCGGAAAAAGCACTCTCGTTATGAATTCAGACGGCACTATCACCCTCGACGGCCCCACTCACTTGGCGCTGAATCCGCAGTAA
PROTEIN sequence
Length: 740
MSFVSTGNKSAGSHGPEITTPPIAGESGGMSAGSAATGVADAAEQMAEQAAADLFGALPEPSGLVKAAVAAAQAAAAVAGISDITGAAQDAAVSLAAGGPGAHNVTVSGSAVPPQMLLFASINGSEKLGSLFTYIVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKRYISGLVTAARVVGHEGRSVTYELRIEPWLKLLTHSSDYKAFQNKTVVDILDEVLADYDFPVEKRLVENYPIRTWQVQYSETDFDFIQRLMQEWGIYWWFEHSENSHTLVLADAISAHKACPDSPLVEWHQEGLKLDKEFIHTITASERLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYEHYEWPGDYFDKGEGEMLTRIRMEAQRSPGSRVGGAGNIRTLMTGYTFTLMNHPTAEVNQEYLLVQTTLFLRDNAQHSGQDQHFTYVTTFELHPTSEVYRPQRTLSKPHTKGPQSAIVTGPAGQEIWTDKYGRVKVQFGWDRYGKNDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEEVRFLAEKDLNTVVKNNETHTVKADRTKTIIYNETSTVKIDRTEFVDGKHTETIKGDRDITVTEGKQSLTVKTGNREIKVETGICTETVEGDITITSKTGAIHLTAATQIKLTVGKSTLVMNSDGTITLDGPTHLALNPQ*