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71_003_scaffold_162_16

Organism: 71_003_Escherichia_coli_51_127

partial RP 33 / 55 MC: 4 BSCG 36 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(18226..18711)

Top 3 Functional Annotations

Value Algorithm Source
Hcp1 family type VI secretion system effector n=11 Tax=Escherichia coli RepID=L3EHD4_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 161.0
  • Bit_score: 327
  • Evalue 7.30e-87
Putative cytoplasmic protein {ECO:0000313|EMBL:EGI42104.1}; TaxID=656444 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TA280.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 161.0
  • Bit_score: 327
  • Evalue 1.00e-86
Protein hcp1 similarity KEGG
DB: KEGG
  • Identity: 95.7
  • Coverage: 161.0
  • Bit_score: 320
  • Evalue 2.80e-85

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 486
ATGTCTTATGATATTTTTCTGAAAATTGACGGCATTGACGGCGAGTCAATGGATGACAAACATAAAAATGAAATTGAGGTGTTGAGCTGGCGCTGGAATATCCACCAGGAGTCCACCATGCACGCGGGTAGCGGTCTGGGATCCGGCAAGGTATCCGTAACTAATCTTTCATTTGAACACTATATCGATCGCGCCAGCCCGAACCTGTTCAAATACTGCGCCTCCGGCAAACACATTCCGAAAGCCGTGCTGACCATGCGCAAAGCAGGCGGCAACCCACTGGAATACCTCAAATACAGTTTTACTGATTTGATCGTAGCAATGGTTTCGCCCAGCGGGAGTCAGGGGGGAGAAATAGCTTCTCGTGAGTCAGTCGAACTCTCTTTCAGCACCGTGAAGCAGGAATACGTGGTGCAGAACCAGCAAGGTGGCAGCGGCGGCACCATCACCGCAGGCTACGACTTCAAGGCCAATAAAGAAATTTAA
PROTEIN sequence
Length: 162
MSYDIFLKIDGIDGESMDDKHKNEIEVLSWRWNIHQESTMHAGSGLGSGKVSVTNLSFEHYIDRASPNLFKYCASGKHIPKAVLTMRKAGGNPLEYLKYSFTDLIVAMVSPSGSQGGEIASRESVELSFSTVKQEYVVQNQQGGSGGTITAGYDFKANKEI*