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71_007_scaffold_2

Search features with annotation key words

Displaying items 61-90 of 286 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_007_scaffold_2_61
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(79543..80367)
DNA (825bp) protein (275aa)
Integral membrane protein n=8 Tax=Bifidobacterium RepID=E3EN09_BIFBS
Integral membrane protein {ECO:0000313|EMBL:KFI90915.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
ybhL; inner membrane protein
71_007_scaffold_2_62
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(80530..81360)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6Q5E4_9BIFI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31801.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hypothetical protein
71_007_scaffold_2_63
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

81546..83033
DNA (1488bp) protein (496aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4VAU0_BIFBI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31802.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
atypical histidine kinase sensor oftwo-component system
71_007_scaffold_2_64
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

83038..83721
DNA (684bp) protein (228aa)
transcriptional regulator (EC:3.1.1.61)
Transcriptional regulatory protein n=6 Tax=Bifidobacterium RepID=E4NXT8_BIFBP
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31803.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
71_007_scaffold_2_65
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

83900..86002
DNA (2103bp) protein (701aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WIZ5_BIFBI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31804.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hypothetical protein
71_007_scaffold_2_66
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(86185..86799)
DNA (615bp) protein (205aa)
pncA; Pyrazinamidase/Nicotinamidase (EC:3.5.1.- 3.5.1.19)
Pyrazinamidase/Nicotinamidase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XZ33_BIFBU
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31805.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
71_007_scaffold_2_67
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(86846..88132)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=2 Tax=Scardovia wiggsiae RepID=J0DFR4_9BIFI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31806.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hypothetical protein
71_007_scaffold_2_68
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(88666..91365)
DNA (2700bp) protein (900aa)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
aconitase (EC:4.2.1.3)
Aconitase n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6DCX4_BIFLN
71_007_scaffold_2_69
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(91431..94028)
DNA (2598bp) protein (866aa)
Cation-transporting ATPase n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8APM9_BIFLN
cation-transporting ATPase
Cation-transporting ATPase {ECO:0000313|EMBL:AEI97304.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
71_007_scaffold_2_70
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(94133..94717)
DNA (585bp) protein (195aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WH33_BIFBI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31810.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
sugar ABC transporter periplasmic protein
71_007_scaffold_2_71
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(94815..96071)
DNA (1257bp) protein (419aa)
tRNA (uracil-5-) -methyltransferase; K00599 [EC:2.1.1.-]
TRAM domain protein n=3 Tax=Bifidobacterium RepID=E4V8P6_BIFBI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31811.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
71_007_scaffold_2_72
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(96104..96811)
DNA (708bp) protein (236aa)
Hypothetical membrane protein n=2 Tax=Bifidobacterium longum RepID=B3DQW0_BIFLD
Uncharacterized protein {ECO:0000313|EMBL:KFI92157.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
hypothetical protein
71_007_scaffold_2_73
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(96957..97784)
DNA (828bp) protein (276aa)
PF12502 family protein n=3 Tax=Bifidobacterium longum subsp. longum RepID=I3B9K4_BIFLN
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31813.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hypothetical protein
71_007_scaffold_2_74
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(97886..98746)
DNA (861bp) protein (287aa)
xth; exodeoxyribonuclease III (EC:3.1.11.2); K01142 exodeoxyribonuclease III [EC:3.1.11.2]
Putative exodeoxyribonuclease III n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4V8P3_BIFBI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31814.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
71_007_scaffold_2_75
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(98866..100881)
DNA (2016bp) protein (672aa)
Diguanylate cyclase {ECO:0000313|EMBL:KFI92154.1}; EC=3.6.3.24 {ECO:0000313|EMBL:KFI92154.1};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
Putative phosphonate C-P lyase system protein PhnK n=1 Tax=Bifidobacterium angulatum DSM 20098 = JCM 7096 RepID=C4FEC8_9BIFI
dppD; hypothetical protein; K02031 peptide/nickel transport system ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein
71_007_scaffold_2_76
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(100899..101870)
DNA (972bp) protein (324aa)
ABC transporter, permease protein n=1 Tax=Bifidobacterium angulatum DSM 20098 = JCM 7096 RepID=C4FEC7_9BIFI
Peptide ABC transporter permease {ECO:0000313|EMBL:KFI92153.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
peptide ABC transporter permease; K02034 peptide/nickel transport system permease protein
71_007_scaffold_2_77
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(101889..102815)
DNA (927bp) protein (309aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GQE3_BIFLS
Binding-protein-dependent transport system inner membrane protein {ECO:0000313|EMBL:KFI92152.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein
71_007_scaffold_2_78
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(103255..104901)
DNA (1647bp) protein (549aa)
Dipeptide ABC transporter substrate binding component n=8 Tax=Bifidobacterium longum RepID=E8MJD2_BIFL2
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31818.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
dipeptide ABC transporter substrate-binding protein
71_007_scaffold_2_79
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(105227..106282)
DNA (1056bp) protein (352aa)
Tyrosine recombinase XerC n=4 Tax=Bifidobacterium RepID=E4V8N7_BIFBI
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
tyrosine recombinase; K03733 integrase/recombinase XerC
71_007_scaffold_2_80
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

106348..106599
DNA (252bp) protein (84aa)
Uncharacterized protein n=8 Tax=Bifidobacterium RepID=I3WH22_BIFBI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31820.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hypothetical protein
71_007_scaffold_2_81
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(107240..108307)
DNA (1068bp) protein (356aa)
Prephenate dehydrogenase {ECO:0000313|EMBL:KFI92148.1}; EC=1.3.1.12 {ECO:0000313|EMBL:KFI92148.1};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
tyrA2; prephenate dehydrogenase (EC:1.3.1.43); K04517 prephenate dehydrogenase [EC:1.3.1.12]
Prephenate dehydrogenase (Fragment) n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2MUX1_BIFBI
71_007_scaffold_2_82
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(108301..109338)
DNA (1038bp) protein (346aa)
pheA; prephenate dehydratase (EC:4.2.1.51)
Prephenate dehydratase n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CGB7_BIFBI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31822.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
71_007_scaffold_2_83
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(109343..110068)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZLZ5_BIFBR
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31823.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
Conserved hypothetical membrane spanning protein
71_007_scaffold_2_84
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(110819..112750)
DNA (1932bp) protein (644aa)
GTP-binding protein TypA {ECO:0000313|EMBL:KFI92145.1}; EC=3.6.5.- {ECO:0000313|EMBL:KFI92145.1};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
typA; GTP-binding protein TypA (EC:2.7.7.4); K06207 GTP-binding protein
GTP-binding protein TypA/BipA n=7 Tax=Bifidobacterium RepID=E4P0S7_BIFBP
71_007_scaffold_2_85
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(113012..114346)
DNA (1335bp) protein (445aa)
Sugar (And other) transporter family protein n=2 Tax=Bifidobacterium longum RepID=T2I3Q7_BIFLN
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31825.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
sugar transport protein; K08369 MFS transporter, putative metabolite:H+ symporter
71_007_scaffold_2_86
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(114476..115351)
DNA (876bp) protein (292aa)
Phosphohydrolase {ECO:0000313|EMBL:KFI92143.1}; EC=3.6.1.13 {ECO:0000313|EMBL:KFI92143.1};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
phosphohydrolase (EC:3.6.1.13)
Phosphohydrolase (MutT/nudix family protein) n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P0S2_BIFBP
71_007_scaffold_2_87
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(115531..116250)
DNA (720bp) protein (240aa)
Segregation and condensation protein B n=3 Tax=Bifidobacterium bifidum RepID=E3ENV1_BIFBS
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
scpB; segregation and condensation protein ScpB; K06024 segregation and condensation protein B
71_007_scaffold_2_88
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(116247..117122)
DNA (876bp) protein (292aa)
ScpA/B protein n=3 Tax=Bifidobacterium breve RepID=D4BS30_BIFBR
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31828.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
scpA; Segregation and condensation protein ScpA
71_007_scaffold_2_89
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(117125..118084)
DNA (960bp) protein (320aa)
Cobyrinic acid a,c-diamide synthase n=4 Tax=Bifidobacterium longum RepID=B7GQC6_BIFLS
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31829.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
Cobyrinic acid a,c-diamide synthase; K03496 chromosome partitioning protein
71_007_scaffold_2_90
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(118163..119113)
DNA (951bp) protein (317aa)
Tyrosine recombinase XerD n=1 Tax=Bifidobacterium angulatum DSM 20098 = JCM 7096 RepID=C4FEA8_9BIFI
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
integrase/recombinase; K04763 integrase/recombinase XerD
Displaying items 61-90 of 286 in total

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