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71_007_scaffold_13_8

Organism: 71_007_Bifidobacterium_scardovii_65_86

near complete RP 52 / 55 MC: 8 BSCG 51 / 51 MC: 2 ASCG 14 / 38
Location: comp(10165..10938)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 257.0
  • Bit_score: 508
  • Evalue 6.80e-141
RNA pseudouridylate synthase; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] similarity KEGG
DB: KEGG
  • Identity: 89.1
  • Coverage: 257.0
  • Bit_score: 468
  • Evalue 1.00e-129
Pseudouridine synthase n=2 Tax=Bifidobacterium dentium RepID=E0Q6B5_9BIFI similarity UNIREF
DB: UNIREF100
  • Identity: 89.5
  • Coverage: 257.0
  • Bit_score: 469
  • Evalue 2.50e-129

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Taxonomy

Bifidobacterium scardovii → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 774
ATGCCAAACGCATATTCCCGCGCCGCGAAGGCGCAAGACAGTAATCAGGAAGGCATTCGCCTGCAGAAGCTGCTGGCGCAGGCCGGATTCGGATCCCGCCGCAAGTGCGAGCAGATCATCACCGAAGGACGCGTCGAGGTCGACGGGGAGCTGGTCACCGAGCTCGGCACGCGCGTCGACATCGACCGTCAGCAGGTGCGCGTCGACGGATCGCGCATCCGCCTCAACCCGAACCACGTCACGCTGGCGCTCAACAAGCCGCGCCGCGTGCTGAGCACGATGGACGACCCGAAGGGCCGCTACACGCTGCGCGACATCGTCGGCGACAAATACGAGCGCATCTTCCACATGGGCCGCCTGGACTACGATTCCGAGGGCCTGATCCTCATGACGAACGACGGCGAGCTGAGCCAGCACGTCATGCACCCCAAGTACGAGGTCGAAAAGACCTATATCGCCACCGTTTCGGGCCGCATCAGCGGCACCGTGTGCCGCCGCCTGGTCACCACGGGCGTGCAGCTGGACGACGGCTGGATCAAGCTCGACCACTGCGCGATCATCGACGCGAACCGCGATTCGACCATCGTCAAGGTCGTGCTGCATTCGGGCAAGAACCGCATCGTGCGCCGCATCTTCGGCTCGATCGGCTTCCCCGTCAAGCGCCTCGTGCGCACGCAGATCGGCCCGATCAAGCTCGGCGAGCTGAAGTCCGGGTCGTACCGCGTGCTCTCGCAGGCCGAGGTGCGTTCCCTCTCGAAGGAGGTCGGGCTGTGA
PROTEIN sequence
Length: 258
MPNAYSRAAKAQDSNQEGIRLQKLLAQAGFGSRRKCEQIITEGRVEVDGELVTELGTRVDIDRQQVRVDGSRIRLNPNHVTLALNKPRRVLSTMDDPKGRYTLRDIVGDKYERIFHMGRLDYDSEGLILMTNDGELSQHVMHPKYEVEKTYIATVSGRISGTVCRRLVTTGVQLDDGWIKLDHCAIIDANRDSTIVKVVLHSGKNRIVRRIFGSIGFPVKRLVRTQIGPIKLGELKSGSYRVLSQAEVRSLSKEVGL*