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71_007_scaffold_306

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Displaying items 61-90 of 105 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_007_scaffold_306_61
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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55242..56708
DNA (1467bp) protein (489aa)
D-mannonate oxidoreductase n=5 Tax=Escherichia coli RepID=H5FGJ9_ECOLX
yeiQ; dehydrogenase, NAD-dependent
D-mannonate oxidoreductase {ECO:0000313|EMBL:KIG52076.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
71_007_scaffold_306_62
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56826..57812
DNA (987bp) protein (329aa)
Uncharacterized protein n=370 Tax=Enterobacteriaceae RepID=J7Q8F4_ECOLX
cobalamin synthesis protein P47K
Uncharacterized protein {ECO:0000313|EMBL:EZE26619.1}; TaxID=1446741 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O45:H2 str. 2009C-3686.;"
71_007_scaffold_306_63
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57851..58564
DNA (714bp) protein (238aa)
Inner membrane protein yeiU n=1 Tax=Escherichia coli KTE210 RepID=L3E8R6_ECOLX
Inner membrane protein yeiU {ECO:0000313|EMBL:ESP08168.1}; TaxID=1280986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 36 (4-5675286).;"
hypothetical protein
71_007_scaffold_306_64
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58976..59542
DNA (567bp) protein (189aa)
Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase n=1132 Tax=Enterobacteriaceae RepID=MEPS_ECO57
spr; outer membrane lipoprotein; K13694 lipoprotein Spr
NlpC/P60 family protein {ECO:0000313|EMBL:EIG81533.1}; TaxID=869669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2741.;"
71_007_scaffold_306_65
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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59723..60646
DNA (924bp) protein (308aa)
Uncharacterized protein n=2 Tax=Shigella dysenteriae RepID=Q32HX6_SHIDS
phage resistance protein
Cyclic diguanylate phosphodiesterase (EAL) domain protein {ECO:0000313|EMBL:EII32113.1}; TaxID=869687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4.0967.;"
71_007_scaffold_306_66
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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60666..60944
DNA (279bp) protein (93aa)
Putative lipoprotein n=1 Tax=Escherichia coli 07798 RepID=K3JHW9_ECOLX
rtn; hypothetical protein
EAL domain protein {ECO:0000313|EMBL:KDW85336.1}; TaxID=1444081 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S1_C2.;"
71_007_scaffold_306_67
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61274..63088
DNA (1815bp) protein (605aa)
Oligopeptide transporter subunit n=1 Tax=Escherichia coli KTE210 RepID=L3E8U1_ECOLX
hypothetical protein; K13893 microcin C transport system substrate-binding protein
Antibiotic ABC transporter substrate-binding protein {ECO:0000313|EMBL:AIZ87754.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
71_007_scaffold_306_68
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63089..64183
DNA (1095bp) protein (365aa)
Inner membrane ABC transporter permease protein YejB n=834 Tax=Enterobacteriaceae RepID=YEJB_ECO57
yejB; putative oligopeptide transporter subunit; K13894 microcin C transport system permease protein
Inner membrane ABC transporter permease protein yejB {ECO:0000313|EMBL:KEN89792.1}; TaxID=1444123 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C1.;"
71_007_scaffold_306_69
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64183..65208
DNA (1026bp) protein (342aa)
ABC transporter, permease protein n=705 Tax=Enterobacteriaceae RepID=A8A242_ECOHS
microcin C ABC transporter permease; K13895 microcin C transport system permease protein
YejE {ECO:0000313|EMBL:EHX25652.1}; TaxID=868192 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12B.;"
71_007_scaffold_306_70
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65210..66799
DNA (1590bp) protein (530aa)
Fused predicted oligopeptide transporter subunits of ABC superfamilly: ATP-binding components n=74 Tax=Escherichia coli RepID=C8U6C2_ECO10
microcin C ABC transporter ATP-binding protein YejF
Microcin ABC transporter ATP-binding protein {ECO:0000313|EMBL:EZA30355.1}; TaxID=1446704 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O174:H8 str. 04-3038.;"
71_007_scaffold_306_71
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(66803..67147)
DNA (345bp) protein (115aa)
Uncharacterized protein YejG n=1090 Tax=Enterobacteriaceae RepID=YEJG_ECOL6
yejG; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHP64061.1}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4_1_47FAA.;"
71_007_scaffold_306_72
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67480..68640)
DNA (1161bp) protein (387aa)
Bicyclomycin/multidrug efflux system n=4 Tax=Escherichia coli RepID=I0VSG6_ECOLX
Bicyclomycin resistance protein {ECO:0000313|EMBL:ELC07954.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
bcr; bicyclomycin resistance protein; K07552 MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein
71_007_scaffold_306_73
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(68668..69363)
DNA (696bp) protein (232aa)
rsuA; 16S rRNA pseudouridylate synthase A; K06183 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1116032 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2871950.;"
Pseudouridine synthase n=7 Tax=Enterobacteriaceae RepID=D2AEZ4_SHIF2
71_007_scaffold_306_74
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69512..70237
DNA (726bp) protein (242aa)
Type III restriction enzyme, res subunit n=2 Tax=Escherichia coli RepID=H4MTY6_ECOLX
putative ATP-dependent helicase
Uncharacterized protein YejH {ECO:0000313|EMBL:AKA91265.1}; TaxID=941323 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli VR50.;"
71_007_scaffold_306_75
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

70207..71232
DNA (1026bp) protein (342aa)
Helicase conserved C-terminal domain protein n=2 Tax=Escherichia coli RepID=N3PBT2_ECOLX
putative ATP-dependent helicase
Helicase conserved C-terminal domain protein {ECO:0000313|EMBL:KEJ46664.1}; TaxID=1444266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-427-07_S4_C3.;"
71_007_scaffold_306_76
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


71357..71641
DNA (285bp) protein (95aa)
50S ribosomal protein L25 n=1 Tax=Shigella flexneri serotype 5b (strain 8401) RepID=Q0T2T6_SHIF8
rplY; 50S ribosomal protein L25; K02897 large subunit ribosomal protein L25
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01336, ECO:0000256|SAAS:SAAS00147491}; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C1.;"
71_007_scaffold_306_77
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(71780..72787)
DNA (1008bp) protein (336aa)
Nucleoid-associated protein YejK n=1077 Tax=Enterobacteriaceae RepID=NDPA_ECO24
yejK; nucleotide associated protein; K06899 nucleoid-associated protein
Nucleoid-associated protein YejK {ECO:0000256|HAMAP-Rule:MF_00730}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
71_007_scaffold_306_78
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

72969..73196
DNA (228bp) protein (76aa)
UPF0352 protein YejL n=1208 Tax=Enterobacteriaceae RepID=YEJL_ECO55
yejL; hypothetical protein; K09904 hypothetical protein
UPF0352 protein YejL {ECO:0000256|HAMAP-Rule:MF_00816}; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 107-1.;"
71_007_scaffold_306_79
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

73216..74976
DNA (1761bp) protein (587aa)
Sulfatase family protein n=306 Tax=Enterobacteriaceae RepID=A7ZP13_ECO24
Sulfatase {ECO:0000313|EMBL:AIF64720.1}; TaxID=340184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B7A.;"
yejM; putative hydrolase, inner membrane
71_007_scaffold_306_trna_1
unknown

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75051..75124
DNA (74bp)
transferRNA Pro
71_007_scaffold_306_80
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(75436..77793)
DNA (2358bp) protein (786aa)
Uncharacterized protein n=13 Tax=Escherichia coli RepID=G1ZL91_ECOLX
Outer membrane autotransporter barrel domain protein {ECO:0000313|EMBL:EMX48033.1}; TaxID=1116139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP020980.2.;"
hypothetical protein
71_007_scaffold_306_81
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78113..78760
DNA (648bp) protein (216aa)
Nitrate/nitrite response regulator (Sensor NarQ) n=732 Tax=Enterobacteriaceae RepID=J7QTA7_ECOLX
narP; transcriptional regulator NarP; K07685 two-component system, NarL family, nitrate/nitrite response regulator NarP
Bacterial regulatory s, luxR family protein {ECO:0000313|EMBL:KDZ19491.1}; TaxID=1444185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C3.;"
71_007_scaffold_306_82
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(78795..79847)
DNA (1053bp) protein (351aa)
Heme lyase, CcmH subunit n=65 Tax=Escherichia coli RepID=C8UDD9_ECO1A
ccmH; heme lyase, CcmH subunit; K02200 cytochrome c-type biogenesis protein CcmH
Heme lyase subunit CcmH {ECO:0000313|EMBL:EZD32766.1}; TaxID=1446533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:NM str. K6722.;"
71_007_scaffold_306_83
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79844..80401)
DNA (558bp) protein (186aa)
Thiol:disulfide interchange protein DsbE n=1308 Tax=Enterobacteriaceae RepID=DSBE_ECO57
ccmG; periplasmic thioredoxin of cytochrome c-type biogenesis; K02199 cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
Thiol:disulfide interchange protein DsbE {ECO:0000313|EMBL:EZA30328.1}; TaxID=1446704 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O174:H8 str. 04-3038.;"
71_007_scaffold_306_84
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(80398..82341)
DNA (1944bp) protein (648aa)
Cytochrome c-type biogenesis protein CcmF n=2 Tax=Escherichia coli RepID=S1HDX8_ECOLX
Cytochrome c-type biogenesis protein CcmF {ECO:0000313|EMBL:EOW05641.1}; TaxID=1182701 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE102.;"
ccmF; heme lyase, CcmF subunit; K02198 cytochrome c-type biogenesis protein CcmF
71_007_scaffold_306_85
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82338..82817)
DNA (480bp) protein (160aa)
Cytochrome c-type biogenesis protein CcmE n=1370 Tax=Enterobacteriaceae RepID=CCME_ECO24
ccmE; periplasmic heme chaperone; K02197 cytochrome c-type biogenesis protein CcmE
Cytochrome c-type biogenesis protein CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; Cytochrome c maturation protein E {ECO:0000256|HAMAP-Rule:MF_01959}; Heme chaperone CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; TaxID=1444235 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-316-03_S4_C2.;"
71_007_scaffold_306_86
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82814..83023)
DNA (210bp) protein (70aa)
Heme exporter protein D n=1376 Tax=Enterobacteriaceae RepID=CCMD_ECO57
cytochrome c biogenesis protein CcmD; K02196 heme exporter protein D
Heme exporter protein CcmD {ECO:0000313|EMBL:EHU42437.1}; TaxID=868140 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2C.;"
71_007_scaffold_306_87
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(83020..83757)
DNA (738bp) protein (246aa)
Heme exporter protein C n=1371 Tax=Enterobacteriaceae RepID=CCMC_ECO57
ccmC; heme exporter subunit; K02195 heme exporter protein C
Heme exporter protein C {ECO:0000313|EMBL:EOV61166.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
71_007_scaffold_306_88
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(83799..84461)
DNA (663bp) protein (221aa)
Heme exporter protein B n=1164 Tax=Enterobacteriaceae RepID=CCMB_ECO57
heme exporter protein CcmB; K02194 heme exporter protein B
Heme exporter protein B {ECO:0000256|PIRNR:PIRNR002764}; TaxID=869688 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2.3916.;"
71_007_scaffold_306_89
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84458..85075)
DNA (618bp) protein (206aa)
ccmA; cytochrome c biogenesis protein CcmA; K02193 heme exporter protein A [EC:3.6.3.41]
Cytochrome c biogenesis ATP-binding export protein CcmA {ECO:0000256|HAMAP-Rule:MF_01707}; EC=3.6.3.41 {ECO:0000256|HAMAP-Rule:MF_01707};; Heme exporter protein A {ECO:0000256|HAMAP-Rule:MF_01707}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
Cytochrome c biogenesis ATP-binding export protein CcmA n=224 Tax=Escherichia RepID=CCMA_ECOUT
Displaying items 61-90 of 105 in total

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