ggKbase home page

71_007_scaffold_3636_2

Organism: 71_007_Escherichia_coli_47_20

partial RP 1 / 55 BSCG 1 / 51 ASCG 0 / 38
Location: comp(555..872)

Top 3 Functional Annotations

Value Algorithm Source
IncF plasmid conjugative transfer protein TrbD n=27 Tax=Escherichia coli RepID=D7JJ62_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 105.0
  • Bit_score: 210
  • Evalue 8.60e-52
Conjugal transfer protein TrbD {ECO:0000313|EMBL:EOU85772.1}; TaxID=1169353 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE36.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 105.0
  • Bit_score: 210
  • Evalue 1.20e-51
trbD; conjugative transfer protein similarity KEGG
DB: KEGG
  • Identity: 90.3
  • Coverage: 103.0
  • Bit_score: 188
  • Evalue 8.40e-46

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 318
ATGAACATGCGTAATATTAATGTTATTACTGCCCGCGCTGTGCCGGATAAAAACGTATCAGATGATTTTATGCATGCTGTTCTCAGTAACTGCACCACAAGAATCGCACTTCCTGCGCCGAAGAAATTCAGTTCTGAATCATTGCCGCACAATTTTAATATGGCTGCTGTCGGAGTGATGAAGAAGGGTATGTCGATGAGTTTATTTTCTTCTCCGGGAAATACAGTAGTCTCCGGACAACCCTGTGCAGGAAAAACAAATCTGACAGTAGAGTTAATTTCTGCTGTTGTGGAGAGTAATAAAAAAGGAGAAGGGTAA
PROTEIN sequence
Length: 106
MNMRNINVITARAVPDKNVSDDFMHAVLSNCTTRIALPAPKKFSSESLPHNFNMAAVGVMKKGMSMSLFSSPGNTVVSGQPCAGKTNLTVELISAVVESNKKGEG*