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71_008_scaffold_93

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Displaying items 31-51 of 51 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_008_scaffold_93_31
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(33489..34454)
DNA (966bp) protein (322aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1150461 species="Bacteria; Actinobacteri
ksgA; Dimethyladenosine transferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C975_BIFBA
71_008_scaffold_93_32
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34514..36052)
DNA (1539bp) protein (513aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P0J1_BIFBP
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32636.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hypothetical protein
71_008_scaffold_93_trna_1
unknown

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comp(36438..36511)
DNA (74bp)
transferRNA Thr
71_008_scaffold_93_33
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36787..37764)
DNA (978bp) protein (326aa)
protein-disulfide isomerase (EC:2.7.11.1)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XS60_9BIFI
DSBA oxidoreductase {ECO:0000313|EMBL:KFI90715.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
71_008_scaffold_93_34
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37981..40176)
DNA (2196bp) protein (732aa)
Protein kinase domain n=2 Tax=Bifidobacterium RepID=R5NEI3_9BIFI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32634.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
serine/threonine protein kinase
71_008_scaffold_93_35
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

40579..43443
DNA (2865bp) protein (955aa)
bgl5; beta-glucosidase (EC:3.2.1.52); K05349 beta-glucosidase [EC:3.2.1.21]
Glycosyl hydrolase family 3 N-terminal domain protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BU85_9BIFI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32633.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
71_008_scaffold_93_36
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

43692..44393
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Alloscardovia omnicolens RepID=UPI0003B3715E
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32632.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
virR; two-component response regulator VirR
71_008_scaffold_93_37
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

44404..45708
DNA (1305bp) protein (435aa)
hypothetical protein n=1 Tax=Alloscardovia omnicolens RepID=UPI0003B7A154
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32631.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
two-component histidine protein kinase
71_008_scaffold_93_38
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

45892..49017
DNA (3126bp) protein (1042aa)
Beta-glucosidase (EC:3.2.1.21); K05349 beta-glucosidase [EC:3.2.1.21]
glycosyl hydrolase family 3 n=1 Tax=Alloscardovia omnicolens RepID=UPI0003B4CC1A
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32630.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
71_008_scaffold_93_39
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(49340..50188)
DNA (849bp) protein (283aa)
Ion channel n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XXP7_9BIFI
Voltage-gated potassium channel {ECO:0000313|EMBL:KFI90721.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
kch; kch
71_008_scaffold_93_40
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

50350..51033
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum E18 RepID=V6XZ57_BIFLN
Sortase {ECO:0000313|EMBL:KFI90722.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
hypothetical protein
71_008_scaffold_93_41
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

51014..51664
DNA (651bp) protein (217aa)
Helix-turn-helix family protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2HYL2_BIFLN
Transcriptional regulator {ECO:0000313|EMBL:KFI90723.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
hypothetical protein
71_008_scaffold_93_42
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

52040..54493
DNA (2454bp) protein (818aa)
Beta-glucosidase {ECO:0000313|EMBL:KFI90724.1}; EC=3.2.1.21 {ECO:0000313|EMBL:KFI90724.1};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
glycosyl hydrolase; K05349 beta-glucosidase [EC:3.2.1.21]
Glycosyl hydrolase n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8APG9_BIFLN
71_008_scaffold_93_43
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

54486..55058
DNA (573bp) protein (191aa)
PTS system cellobiose-specific IIC component n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8APH0_BIFLN
PTS system cellobiose-specific transporter subunit IIC {ECO:0000313|EMBL:KFI90725.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
PTS system cellobiose-specific transporter subunit IIC
71_008_scaffold_93_44
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(55395..56735)
DNA (1341bp) protein (447aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8APH5_BIFLN
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:KFI90726.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
hypothetical protein
71_008_scaffold_93_45
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(56732..57517)
DNA (786bp) protein (262aa)
LytTr DNA-binding domain protein n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S9I2_9BIFI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32622.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
virR; two-component response regulator VirR
71_008_scaffold_93_46
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

57814..58254
DNA (441bp) protein (147aa)
PTS system, IIA component (EC:2.7.1.69)
PTS system, IIA component n=6 Tax=Bifidobacterium breve RepID=F9XZX5_BIFBU
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32621.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
71_008_scaffold_93_47
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

58398..58694
DNA (297bp) protein (99aa)
PTS system, IIB component (EC:2.7.1.69)
PTS system, Lactose/Cellobiose specific IIB subunit n=3 Tax=Bifidobacterium breve RepID=F6C8Y4_BIFBA
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32620.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
71_008_scaffold_93_48
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

58735..60117
DNA (1383bp) protein (461aa)
PTS system, IIC component (EC:2.7.1.69)
PTS system, IIC component n=2 Tax=Bifidobacterium breve RepID=F9XZX3_BIFBU
PTS system, IIC component {ECO:0000313|EMBL:KFI90730.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
71_008_scaffold_93_49
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

60323..61084
DNA (762bp) protein (254aa)
UbiC transcription regulator-associated domain protein n=3 Tax=Bifidobacterium breve RepID=F6C8Y2_BIFBA
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32618.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
Transcriptional regulator, GntR family
71_008_scaffold_93_50
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

61384..61986
DNA (603bp) protein (201aa)
Sugar ABC transporter ATPase n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8APH8_BIFLN
malK; sugar ABC transporter ATPase; K10243 cellobiose transport system ATP-binding protein
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:AIW43068.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
Displaying items 31-51 of 51 in total

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